RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B YMR010WQ03687 405 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B VBA4Q04602 768 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B CHS5Q12114 671 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B SUT2Q12286 268 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B HRP1Q99383 534 aaKnown RBP1.79□□□□□ -2.12
YGR109W-BYGR109W-B SSM4P40318 1319 aa1.79□□□□□ -2.12
YGR109W-BYGR109W-B VPS15P22219 1454 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B ADE5,7P07244 802 aaKnown RBP1.78□□□□□ -2.12
YGR109W-BYGR109W-B POL3P15436 1097 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B SKI2P35207 1287 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
YGR109W-BYGR109W-B SWD1P39706 426 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B YJL055WP47044 245 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B YDL086WQ07505 273 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B PSR2Q07949 397 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B MMS1Q06211 1407 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B PAN1P32521 1480 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B TPK2P06245 380 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B PHO8P11491 566 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B RPA135P22138 1203 aaKnown RBP1.78□□□□□ -2.12
YGR109W-BYGR109W-B SEC6P32844 805 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B SPC97P38863 823 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B DSS1P39112 969 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B RSC8P43609 557 aaKnown RBP1.78□□□□□ -2.12
YGR109W-BYGR109W-B NOP9P47077 666 aaKnown RBP1.78□□□□□ -2.12
YGR109W-BYGR109W-B YGR151CP53287 111 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B THI22Q06490 572 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B DNF3Q12674 1656 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B SRD1P09007 221 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B MSM1P22438 575 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B CLB1P24868 471 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B TOM20P35180 183 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B MUM2P38236 366 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B LYS9P38999 446 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B YNL144CP53907 740 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B RCF1Q03713 159 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B UFO1Q04511 668 aa1.78□□□□□ -2.12
YGR109W-BYGR109W-B TSR1Q07381 788 aaKnown RBP1.78□□□□□ -2.12
YGR109W-BYGR109W-B DIS3Q08162 1001 aaKnown RBP1.78□□□□□ -2.12
YGR109W-BYGR109W-B PCM1P38628 557 aaKnown RBP1.78□□□□□ -2.13
YGR109W-BYGR109W-B OPT1P40897 799 aa1.78□□□□□ -2.13
YGR109W-BYGR109W-B BNA3P47039 444 aaKnown RBP1.78□□□□□ -2.13
YGR109W-BYGR109W-B MPP10P47083 593 aaKnown RBP1.78□□□□□ -2.13
YGR109W-BYGR109W-B LIA1P47120 325 aaKnown RBP1.78□□□□□ -2.13
YGR109W-BYGR109W-B CPR8P53728 308 aa1.78□□□□□ -2.13
YGR109W-BYGR109W-B JJJ1P53863 590 aa1.78□□□□□ -2.13
YGR109W-BYGR109W-B RIM13Q03792 727 aa1.78□□□□□ -2.13
YGR109W-BYGR109W-B GFD1Q04839 188 aaKnown RBP1.78□□□□□ -2.13
YGR109W-BYGR109W-B THI7Q05998 598 aa1.78□□□□□ -2.13
YGR109W-BYGR109W-B TY1B-NL2Q99337 1749 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B CHC1P22137 1653 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B FUR1P18562 216 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B NSE5Q03718 556 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B YDL073WQ07454 984 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B USV1Q12132 391 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B HIS4P00815 799 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B SSB1P11484 613 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B RPC53P25441 422 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B SWI3P32591 825 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B SDS22P36047 338 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B OCA5P38738 679 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B SSB2P40150 613 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B EPL1P43572 832 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B COX18P53239 316 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B ENT2Q05785 613 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B YAP7Q08182 245 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B SCC2Q04002 1493 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B TUF1P02992 437 aaKnown RBP1.77□□□□□ -2.13
YGR109W-BYGR109W-B CDC9P04819 755 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B CDC15P27636 974 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B BCS1P32839 456 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B SAP4P53036 818 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B YNL058CP53947 316 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B MLH3Q12083 715 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B RKI1Q12189 258 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B GIN4Q12263 1142 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B TRM732Q03496 1420 aa1.77□□□□□ -2.13
YGR109W-BYGR109W-B TAF5P38129 798 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B PBP2P38151 413 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
YGR109W-BYGR109W-B CAB2P40506 365 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B ARF3P40994 183 aaRIP-Chip data1.76□□□□□ -2.13not detected
YGR109W-BYGR109W-B SRB7P47822 140 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B ERO1Q03103 563 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B MDM20Q12387 796 aaKnown RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B MRC1P25588 1096 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B EFB1P32471 206 aaKnown RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B LOT5P34234 306 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B DHR2P36009 735 aaPredicted RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B YKL133CP36066 463 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B YMC2P38087 329 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B SRP72P38688 640 aaKnown RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B SSZ1P38788 538 aaKnown RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B LNP1P38878 278 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B GET2P40056 285 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B NUP82P40368 713 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B CCT5P40413 562 aaKnown RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B ULP2P40537 1034 aaPredicted RBP1.76□□□□□ -2.13
YGR109W-BYGR109W-B NET1P47035 1189 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B HOL1P53389 586 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B SPC98P53540 846 aa1.76□□□□□ -2.13
YGR109W-BYGR109W-B ULA1Q12059 462 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms