RNA–Protein interactions for RNA: YGR089W

NNF2, Transcript of Protein that exhibits physical and genetic interactions with Rpb8p, yeast

Gene NNF2, Length 2,811 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNF2	YGR089W	FRS1	P15624	595 aa	Known RBP	0.92	□□□□□ -2.26
NNF2	YGR089W	SIN3	P22579	1536 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	PRP22	P24384	1145 aa	Known RBP	0.92	□□□□□ -2.26
NNF2	YGR089W	TFB2	Q02939	513 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	POB3	Q04636	552 aa	Known RBP	0.92	□□□□□ -2.26
NNF2	YGR089W	SMA2	Q04658	369 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	YFT2	Q06676	274 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	VHS3	Q08438	674 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
NNF2	YGR089W	PRP16	P15938	1071 aa	Predicted RBP	0.92	□□□□□ -2.26
NNF2	YGR089W	IME1	P21190	360 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
NNF2	YGR089W	PET127	P32606	800 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	YKU70	P32807	602 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	PPE1	P38796	400 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	MGS1	P40151	587 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	YNL193W	P53870	558 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	VBA4	Q04602	768 aa	Known RBP	0.92	□□□□□ -2.26
NNF2	YGR089W	YLR407W	Q06070	228 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	YPS7	Q06325	596 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	GUD1	Q07729	489 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	IZH3	Q07959	543 aa		0.92	□□□□□ -2.26
NNF2	YGR089W	RDL1	Q12305	139 aa	Known RBP	0.92	□□□□□ -2.26
NNF2	YGR089W	YTA7	P40340	1379 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	LEU2	P04173	364 aa	Predicted RBP	0.91	□□□□□ -2.26
NNF2	YGR089W	LOT5	P34234	306 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	YKR075C	P36155	307 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	BUD8	P41698	603 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	OSW7	P43611	510 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	IRC7	P43623	340 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	SWI6	P09959	803 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	RPL8A	P17076	256 aa	Known RBP	0.91	□□□□□ -2.26
NNF2	YGR089W	MAL31	P38156	614 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	COP1	P53622	1201 aa	Known RBP	0.91	□□□□□ -2.26
NNF2	YGR089W	ALG12	P53730	551 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	YMR210W	Q03649	449 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	STP4	Q07351	490 aa		0.91	□□□□□ -2.26
NNF2	YGR089W	RRP14	P36080	434 aa	Known RBP	0.9	□□□□□ -2.26
NNF2	YGR089W	TMN3	P40071	706 aa		0.9	□□□□□ -2.26
NNF2	YGR089W	YJR096W	P47137	282 aa		0.9	□□□□□ -2.26
NNF2	YGR089W	YIP4	P53093	235 aa		0.9	□□□□□ -2.26
NNF2	YGR089W	DSE3	Q08729	430 aa		0.9	□□□□□ -2.26
NNF2	YGR089W	RPS21B	Q3E754	87 aa	Known RBP	0.9	□□□□□ -2.26
NNF2	YGR089W	RPS17A	P02407	136 aa	Known RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	YMR085W	P0CF18	432 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	YEL076C-A	P0CX16	216 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	YLR464W	P0CX17	216 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	RPS17B	P14127	136 aa	Known RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	YOX1	P34161	385 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	CDS1	P38221	457 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	TDA3	P38758	523 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	MNN1	P39106	762 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	OAF1	P39720	1047 aa	Predicted RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	YEL076C	P39971	216 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	RET2	P43621	546 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	SDA1	P53313	767 aa	Known RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	SPO1	P53541	631 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	NOP15	P53927	220 aa	Predicted RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	TIM50	Q02776	476 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	FPR4	Q06205	392 aa	Predicted RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	NOP14	Q99207	810 aa	Known RBP	0.9	□□□□□ -2.27
NNF2	YGR089W	DNF1	P32660	1571 aa		0.9	□□□□□ -2.27
NNF2	YGR089W	CYB2	P00175	591 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	LSB5	P25369	354 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	GSY2	P27472	705 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	PRE4	P30657	266 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	RPT3	P33298	428 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	FMP46	P36141	133 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	CRG1	P38892	291 aa	RIP-Chip data	0.89	□□□□□ -2.27	RIP-Chip
NNF2	YGR089W	CKB2	P38930	258 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	HXT6	P39003	570 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	HXT7	P39004	570 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	DHH1	P39517	506 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	PXA1	P41909	870 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	IES1	P43579	692 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	LYS20	P48570	428 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	RNH70	P53331	553 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	FDC1	Q03034	503 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	YMR317W	Q04893	1140 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	TIP41	Q12199	356 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	GLN4	P13188	809 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	CNE1	P27825	502 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	PRP19	P32523	503 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	MTC7	P32633	139 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	DHR2	P36009	735 aa	Predicted RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	OAF3	P36023	863 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	BRN1	P38170	754 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	FAT1	P38225	669 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	EXO1	P39875	702 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	FTR1	P40088	404 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	YGR153W	P48238	217 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	TAF4	P50105	388 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	YGR054W	P53235	642 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	YNL018C	P53976	612 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	DNM1	P54861	757 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	ECM9	Q02202	377 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	EFR3	Q03653	782 aa	Known RBP	0.89	□□□□□ -2.27
NNF2	YGR089W	PPN1	Q04119	674 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	HLR1	Q04429	423 aa		0.89	□□□□□ -2.27
NNF2	YGR089W	YLR281C	Q05863	155 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms