RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C ECM21P38167 1117 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C ACA1P39970 489 aa3.33□□□□□ -1.88
CDH1YGL003C MGS1P40151 587 aa3.33□□□□□ -1.88
CDH1YGL003C YJL070CP40361 888 aa3.33□□□□□ -1.88
CDH1YGL003C AXL1P40851 1208 aa3.33□□□□□ -1.88
CDH1YGL003C CCT7P42943 550 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C ENP2P48234 707 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C TRF5P48561 642 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C MEP3P53390 489 aa3.33□□□□□ -1.88
CDH1YGL003C JJJ1P53863 590 aa3.33□□□□□ -1.88
CDH1YGL003C GIM3P53900 129 aa3.33□□□□□ -1.88
CDH1YGL003C ORC3P54790 616 aa3.33□□□□□ -1.88
CDH1YGL003C SNP1Q00916 300 aaPredicted RBP3.33□□□□□ -1.88
CDH1YGL003C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
CDH1YGL003C HOT1Q03213 719 aa3.33□□□□□ -1.88
CDH1YGL003C ARO80Q04052 950 aa3.33□□□□□ -1.88
CDH1YGL003C SIZ1Q04195 904 aa3.33□□□□□ -1.88
CDH1YGL003C TAF11Q04226 346 aa3.33□□□□□ -1.88
CDH1YGL003C HFD1Q04458 532 aa3.33□□□□□ -1.88
CDH1YGL003C GSF2Q04697 403 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C ARR1Q06596 294 aa3.33□□□□□ -1.88
CDH1YGL003C TSR1Q07381 788 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C MET7Q08645 548 aa3.33□□□□□ -1.88
CDH1YGL003C RRG1Q12167 365 aaPredicted RBP3.33□□□□□ -1.88
CDH1YGL003C ENT1Q12518 454 aa3.33□□□□□ -1.88
CDH1YGL003C YIL002W-AQ3E7Z5 69 aa3.33□□□□□ -1.88
CDH1YGL003C CYC7P00045 113 aa3.33□□□□□ -1.88
CDH1YGL003C SRD1P09007 221 aa3.33□□□□□ -1.88
CDH1YGL003C SWI6P09959 803 aa3.33□□□□□ -1.88
CDH1YGL003C KCC4P25389 1037 aa3.33□□□□□ -1.88
CDH1YGL003C APL1P27351 700 aa3.33□□□□□ -1.88
CDH1YGL003C ACP1P32463 125 aa3.33□□□□□ -1.88
CDH1YGL003C ORC2P32833 620 aa3.33□□□□□ -1.88
CDH1YGL003C MRPL10P36520 322 aa3.33□□□□□ -1.88
CDH1YGL003C PIH1P38768 344 aa3.33□□□□□ -1.88
CDH1YGL003C BDH2P39713 417 aa3.33□□□□□ -1.88
CDH1YGL003C GPP2P40106 250 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C RSM25P40496 264 aa3.33□□□□□ -1.88
CDH1YGL003C CAF16P43569 289 aa3.33□□□□□ -1.88
CDH1YGL003C IRC6P43615 237 aa3.33□□□□□ -1.88
CDH1YGL003C YGL082WP53155 381 aa3.33□□□□□ -1.88
CDH1YGL003C RBG2P53295 368 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C NOG2P53742 486 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C MRPL19P53875 158 aa3.33□□□□□ -1.88
CDH1YGL003C YNL144CP53907 740 aa3.33□□□□□ -1.88
CDH1YGL003C ERV25P54837 211 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C TRS130Q03660 1102 aa3.33□□□□□ -1.88
CDH1YGL003C MTQ2Q03920 221 aaPredicted RBP3.33□□□□□ -1.88
CDH1YGL003C RSM24Q03976 319 aa3.33□□□□□ -1.88
CDH1YGL003C EIS1Q05050 843 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C RSC3Q06639 885 aa3.33□□□□□ -1.88
CDH1YGL003C CUE5Q08412 411 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C LPX1Q12405 387 aaKnown RBP3.33□□□□□ -1.88
CDH1YGL003C DOP1Q03921 1698 aa3.33□□□□□ -1.88
CDH1YGL003C AUS1Q08409 1394 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-LR1P0C2J3 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-FP0CX63 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-GR2P0CX64 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-CP25384 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-DR2Q03494 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY1B-DR1Q03855 1755 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-DR3Q07791 1770 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C TY2B-OR1Q12113 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-DR1Q12472 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-BQ12491 1770 aa3.32□□□□□ -1.88
CDH1YGL003C TY2B-OR2Q12501 1770 aa3.32□□□□□ -1.88
CDH1YGL003C PDX1P16451 410 aa3.32□□□□□ -1.88
CDH1YGL003C APA1P16550 321 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C RFA1P22336 621 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C RPC53P25441 422 aa3.32□□□□□ -1.88
CDH1YGL003C CMK1P27466 446 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C NIP1P32497 812 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C RRP1P35178 278 aaPredicted RBP3.32□□□□□ -1.88
CDH1YGL003C TEF4P36008 412 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C DID4P36108 232 aa3.32□□□□□ -1.88
CDH1YGL003C UBS1P38290 277 aa3.32□□□□□ -1.88
CDH1YGL003C DED81P38707 554 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C NOP16P40007 231 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C MKT1P40850 830 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C YJL055WP47044 245 aa3.32□□□□□ -1.88
CDH1YGL003C NPA3P47122 385 aa3.32□□□□□ -1.88
CDH1YGL003C INP52P50942 1183 aa3.32□□□□□ -1.88
CDH1YGL003C MET13P53128 600 aa3.32□□□□□ -1.88
CDH1YGL003C GTR1Q00582 310 aa3.32□□□□□ -1.88
CDH1YGL003C MSC2Q03455 724 aa3.32□□□□□ -1.88
CDH1YGL003C PRP42Q03776 544 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C SYF1Q04048 859 aaPredicted RBP3.32□□□□□ -1.88
CDH1YGL003C GYL1Q04322 720 aa3.32□□□□□ -1.88
CDH1YGL003C YKU80Q04437 629 aa3.32□□□□□ -1.88
CDH1YGL003C TDA9Q04545 1251 aa3.32□□□□□ -1.88
CDH1YGL003C MCP2Q06567 569 aa3.32□□□□□ -1.88
CDH1YGL003C XYL2Q07993 356 aa3.32□□□□□ -1.88
CDH1YGL003C TAH18Q12181 623 aa3.32□□□□□ -1.88
CDH1YGL003C YBL111CQ3E7Y5 667 aa3.32□□□□□ -1.88
CDH1YGL003C PSK1P31374 1356 aa3.32□□□□□ -1.88
CDH1YGL003C DUR1,2P32528 1835 aaKnown RBP3.32□□□□□ -1.88
CDH1YGL003C USO1P25386 1790 aa3.31□□□□□ -1.88
CDH1YGL003C CDC37P06101 506 aaKnown RBP3.31□□□□□ -1.88
CDH1YGL003C CTT1P06115 562 aa3.31□□□□□ -1.88
CDH1YGL003C OM45P16547 393 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms