RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	MTF2	P10849	440 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	MSD1	P15179	658 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	GUK1	P15454	187 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	OLE1	P21147	510 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	STE50	P25344	346 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	SGF29	P25554	259 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	AAR2	P32357	355 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	SPC110	P32380	944 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	KDX1	P36005	433 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	YKT6	P36015	200 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	PCH2	P38126	564 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	YBR284W	P38150	797 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	SIF2	P38262	535 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	HSL7	P38274	827 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	MTG2	P38860	518 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	DUN1	P39009	513 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	STL1	P39932	569 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	ALD5	P40047	520 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	CCT5	P40413	562 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	NAS2	P40555	220 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	PXA1	P41909	870 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	ALG2	P43636	503 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	HNT2	P49775	206 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	VID30	P53076	958 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	ECM9	Q02202	377 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	VID22	Q05934	901 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	GGA1	Q06336	557 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	NOP6	Q07623	225 aa	Known RBP	4.36	□□□□□ -1.71
UBP6	YFR010W	MDY2	Q12285	212 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	APC2	Q12440	853 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	RTN2	Q12443	393 aa		4.36	□□□□□ -1.71
UBP6	YFR010W	COQ4	O13525	335 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
UBP6	YFR010W	ARG3	P05150	338 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	PUT4	P15380	627 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	POL3	P15436	1097 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	HOP1	P20050	605 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	DBP3	P20447	523 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	DBP5	P20449	482 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	PHO84	P25297	587 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	NPP1	P25353	742 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	YCL049C	P25577	312 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	RME1	P32338	300 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	NGG1	P32494	702 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	GYP6	P32806	458 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	MRP4	P32902	394 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	RPT3	P33298	428 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	SER1	P33330	395 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	PET10	P36139	283 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	PEX32	P38292	413 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	UTP18	P40362	594 aa	Predicted RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	PKP1	P40530	394 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	ARF3	P40994	183 aa	RIP-Chip data	4.35	□□□□□ -1.71	not detected
UBP6	YFR010W	YJR039W	P47107	1121 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	EFM5	P53200	248 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	CBK1	P53894	756 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	GIM3	P53900	129 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	PRO2	P54885	456 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	RRB1	Q04225	511 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	NBA1	Q08229	501 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	ETT1	Q08421	412 aa	Known RBP	4.35	□□□□□ -1.71
UBP6	YFR010W	YPL260W	Q08977	551 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	HMI1	Q12039	706 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	YPR027C	Q12079	277 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	KCS1	Q12494	1050 aa		4.35	□□□□□ -1.71
UBP6	YFR010W	LEU2	P04173	364 aa	Predicted RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	ENA1	P13587	1091 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	SNF5	P18480	905 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	MGM1	P32266	881 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	ASF2	P32448	525 aa	Predicted RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	DPH5	P32469	300 aa	Predicted RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	KRE6	P32486	720 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	SUR1	P33300	382 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	LAM1	P38851	1228 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	UTP9	P38882	575 aa	Known RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	RIX1	P38883	763 aa	Predicted RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	AIM10	P39965	576 aa	Known RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	YER010C	P40011	234 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	OSW5	P40219	148 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	INA22	P40576	216 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	CAF16	P43569	289 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	STU2	P46675	888 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	ASK10	P48361	1146 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	MDR1	P53258	950 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	TNA1	P53322	534 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	SNF12	P53628	566 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	TOF1	P53840	1238 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	EOS1	P53938	366 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	ARP5	P53946	755 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	SFB2	P53953	876 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	DAK1	P54838	584 aa	Known RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	ENA2	Q01896	1091 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	MRPL13	Q02204	264 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	TOF2	Q02208	771 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	OAZ1	Q02803	292 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	MGR3	Q04472	501 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	RSF1	Q05043	376 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	MRD1	Q06106	887 aa	Known RBP	4.34	□□□□□ -1.71
UBP6	YFR010W	TFC6	Q06339	672 aa		4.34	□□□□□ -1.71
UBP6	YFR010W	ATG33	Q06485	197 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms