RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W RLP24Q07915 199 aaKnown RBP4.34□□□□□ -1.71
TPA1YER049W NHA1Q99271 985 aa4.34□□□□□ -1.71
TPA1YER049W ILV1P00927 576 aaKnown RBP4.33□□□□□ -1.72
TPA1YER049W YML002WP0CF17 737 aa4.33□□□□□ -1.72
TPA1YER049W GCD2P12754 651 aaPredicted RBP4.33□□□□□ -1.72
TPA1YER049W CLN3P13365 580 aa4.33□□□□□ -1.72
TPA1YER049W HEM15P16622 393 aa4.33□□□□□ -1.72
TPA1YER049W KAR3P17119 729 aa4.33□□□□□ -1.72
TPA1YER049W CLB4P24871 460 aa4.33□□□□□ -1.72
TPA1YER049W PUF4P25339 888 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72 RIP-Chip
TPA1YER049W PPG1P32838 368 aa4.33□□□□□ -1.72
TPA1YER049W CBF5P33322 483 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
TPA1YER049W YKL023WP36103 277 aaKnown RBP4.33□□□□□ -1.72
TPA1YER049W RPC37P36121 282 aa4.33□□□□□ -1.72
TPA1YER049W ALG3P38179 458 aa4.33□□□□□ -1.72
TPA1YER049W RRT2P38332 387 aa4.33□□□□□ -1.72
TPA1YER049W TIF4631P39935 952 aaKnown RBP4.33□□□□□ -1.72
TPA1YER049W LCB2P40970 561 aa4.33□□□□□ -1.72
TPA1YER049W PCL10P53124 433 aa4.33□□□□□ -1.72
TPA1YER049W ERO1Q03103 563 aa4.33□□□□□ -1.72
TPA1YER049W YDR278CQ05612 105 aa4.33□□□□□ -1.72
TPA1YER049W FLC1Q08967 793 aa4.33□□□□□ -1.72
TPA1YER049W FLO11P08640 1367 aa4.33□□□□□ -1.72
TPA1YER049W CDC11P32458 415 aa4.33□□□□□ -1.72
TPA1YER049W TIM23P32897 222 aa4.33□□□□□ -1.72
TPA1YER049W TRM2P33753 639 aa4.33□□□□□ -1.72
TPA1YER049W TFC3P34111 1160 aa4.33□□□□□ -1.72
TPA1YER049W YEL1P34225 687 aa4.33□□□□□ -1.72
TPA1YER049W MRP8P35719 219 aa4.33□□□□□ -1.72
TPA1YER049W HSM3P38348 480 aa4.33□□□□□ -1.72
TPA1YER049W SUL1P38359 859 aa4.33□□□□□ -1.72
TPA1YER049W YAR028WP39548 234 aa4.33□□□□□ -1.72
TPA1YER049W IRR1P40541 1150 aa4.33□□□□□ -1.72
TPA1YER049W LSB1P53281 241 aa4.33□□□□□ -1.72
TPA1YER049W ORC4P54791 529 aa4.33□□□□□ -1.72
TPA1YER049W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72 RIP-Chip
TPA1YER049W SPO19Q03029 223 aa4.33□□□□□ -1.72
TPA1YER049W ATG16Q03818 150 aa4.33□□□□□ -1.72
TPA1YER049W YMR074CQ04773 145 aa4.33□□□□□ -1.72
TPA1YER049W SUE1Q06524 206 aa4.33□□□□□ -1.72
TPA1YER049W ACK1Q07622 623 aaPredicted RBP4.33□□□□□ -1.72
TPA1YER049W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
TPA1YER049W FMP25Q08023 583 aa4.33□□□□□ -1.72
TPA1YER049W RKM4Q12504 494 aa4.33□□□□□ -1.72
TPA1YER049W SWI6P09959 803 aa4.32□□□□□ -1.72
TPA1YER049W PHO8P11491 566 aa4.32□□□□□ -1.72
TPA1YER049W SPO16P17122 198 aa4.32□□□□□ -1.72
TPA1YER049W SFL1P20134 766 aa4.32□□□□□ -1.72
TPA1YER049W RET1P22276 1149 aaKnown RBP4.32□□□□□ -1.72
TPA1YER049W PRP22P24384 1145 aaKnown RBP4.32□□□□□ -1.72
TPA1YER049W RPL5P26321 297 aaKnown RBP4.32□□□□□ -1.72
TPA1YER049W KIP1P28742 1111 aa4.32□□□□□ -1.72
TPA1YER049W YBL055CP34220 418 aaPredicted RBP4.32□□□□□ -1.72
TPA1YER049W YKL107WP34251 309 aa4.32□□□□□ -1.72
TPA1YER049W RRP14P36080 434 aaKnown RBP4.32□□□□□ -1.72
TPA1YER049W MCM7P38132 845 aa4.32□□□□□ -1.72
TPA1YER049W FZO1P38297 855 aa4.32□□□□□ -1.72
TPA1YER049W VHC1P38329 1120 aa4.32□□□□□ -1.72
TPA1YER049W MSG5P38590 489 aa4.32□□□□□ -1.72
TPA1YER049W LIN1P38852 340 aaPredicted RBP4.32□□□□□ -1.72
TPA1YER049W ERP6P53198 216 aa4.32□□□□□ -1.72
TPA1YER049W YGR045CP53229 120 aa4.32□□□□□ -1.72
TPA1YER049W NNF2P53253 936 aa4.32□□□□□ -1.72
TPA1YER049W MDM38Q08179 573 aa4.32□□□□□ -1.72
TPA1YER049W ACM1Q08981 209 aa4.32□□□□□ -1.72
TPA1YER049W SBP1P10080 294 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W CBF1P17106 351 aa4.31□□□□□ -1.72
TPA1YER049W SAM2P19358 384 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W RAD51P25454 400 aa4.31□□□□□ -1.72
TPA1YER049W MLS1P30952 554 aa4.31□□□□□ -1.72
TPA1YER049W DPH5P32469 300 aaPredicted RBP4.31□□□□□ -1.72
TPA1YER049W MAE1P36013 669 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W MBP1P39678 833 aa4.31□□□□□ -1.72
TPA1YER049W RSP5P39940 809 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W YGL176CP46945 554 aa4.31□□□□□ -1.72
TPA1YER049W TAN1P53072 289 aaPredicted RBP4.31□□□□□ -1.72
TPA1YER049W ARI1P53111 347 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W YGR035CP53222 116 aa4.31□□□□□ -1.72
TPA1YER049W PXR1P53335 271 aaPredicted RBP4.31□□□□□ -1.72
TPA1YER049W YNL144CP53907 740 aa4.31□□□□□ -1.72
TPA1YER049W DON1Q05610 365 aa4.31□□□□□ -1.72
TPA1YER049W OCA6Q12454 224 aa4.31□□□□□ -1.72
TPA1YER049W SRD1P09007 221 aa4.31□□□□□ -1.72
TPA1YER049W PWP1P21304 576 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W PWP2P25635 923 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W RPS7AP26786 190 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W SIN4P32259 974 aa4.31□□□□□ -1.72
TPA1YER049W DBF4P32325 704 aa4.31□□□□□ -1.72
TPA1YER049W PMC1P38929 1173 aaPredicted RBP4.31□□□□□ -1.72
TPA1YER049W YTA12P40341 825 aa4.31□□□□□ -1.72
TPA1YER049W ASG1P40467 964 aa4.31□□□□□ -1.72
TPA1YER049W HOS4P40480 1083 aa4.31□□□□□ -1.72
TPA1YER049W GPD2P41911 440 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W UBP6P43593 499 aaKnown RBP4.31□□□□□ -1.72
TPA1YER049W ATG36P46983 293 aa4.31□□□□□ -1.72
TPA1YER049W HNT2P49775 206 aa4.31□□□□□ -1.72
TPA1YER049W TAF6P53040 516 aa4.31□□□□□ -1.72
TPA1YER049W ZIP2P53061 704 aa4.31□□□□□ -1.72
TPA1YER049W YGR111WP53265 400 aa4.31□□□□□ -1.72
TPA1YER049W YGR125WP53273 1036 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms