RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C LRO1P40345 661 aa3.2□□□□□ -1.9
SMB1YER029C YIP4P53093 235 aa3.2□□□□□ -1.9
SMB1YER029C PEF1P53238 335 aa3.2□□□□□ -1.9
SMB1YER029C CPR8P53728 308 aa3.2□□□□□ -1.9
SMB1YER029C TRS23Q03784 219 aa3.2□□□□□ -1.9
SMB1YER029C ULA1Q12059 462 aa3.2□□□□□ -1.9
SMB1YER029C YPR027CQ12079 277 aa3.2□□□□□ -1.9
SMB1YER029C MDM20Q12387 796 aaKnown RBP3.2□□□□□ -1.9
SMB1YER029C SAT4P25333 603 aaKnown RBP3.19□□□□□ -1.9
SMB1YER029C CNE1P27825 502 aa3.19□□□□□ -1.9
SMB1YER029C UGP1P32861 499 aaKnown RBP3.19□□□□□ -1.9
SMB1YER029C YBR071WP38243 211 aa3.19□□□□□ -1.9
SMB1YER029C YJR120WP47157 116 aa3.19□□□□□ -1.9
SMB1YER029C COG6P53959 839 aa3.19□□□□□ -1.9
SMB1YER029C DAK1P54838 584 aaKnown RBP3.19□□□□□ -1.9
SMB1YER029C MTD1Q02046 320 aaKnown RBP3.19□□□□□ -1.9
SMB1YER029C FMP30Q02883 468 aa3.19□□□□□ -1.9
SMB1YER029C NGL2Q03264 515 aaKnown RBP3.19□□□□□ -1.9
SMB1YER029C TMA17Q12513 150 aa3.19□□□□□ -1.9
SMB1YER029C RMP1Q12530 201 aa3.19□□□□□ -1.9
SMB1YER029C PMA2P19657 947 aa3.18□□□□□ -1.9
SMB1YER029C AEP2P22136 580 aa3.18□□□□□ -1.9
SMB1YER029C RPA135P22138 1203 aaKnown RBP3.18□□□□□ -1.9
SMB1YER029C MBR1P23493 339 aa3.18□□□□□ -1.9
SMB1YER029C DGR2P32330 852 aa3.18□□□□□ -1.9
SMB1YER029C HEM12P32347 362 aaPredicted RBP3.18□□□□□ -1.9
SMB1YER029C PAF1P38351 445 aa3.18□□□□□ -1.9
SMB1YER029C SRP68P38687 599 aaKnown RBP3.18□□□□□ -1.9
SMB1YER029C PIP2P52960 996 aa3.18□□□□□ -1.9
SMB1YER029C MNT2P53059 558 aa3.18□□□□□ -1.9
SMB1YER029C YNL018CP53976 612 aa3.18□□□□□ -1.9
SMB1YER029C YPL068CQ02749 293 aa3.18□□□□□ -1.9
SMB1YER029C CEF1Q03654 590 aaPredicted RBP3.18□□□□□ -1.9
SMB1YER029C AIM41Q12032 185 aa3.18□□□□□ -1.9
SMB1YER029C CPA2P03965 1118 aaKnown RBP3.17□□□□□ -1.9
SMB1YER029C YEL076C-AP0CX16 216 aa3.17□□□□□ -1.9
SMB1YER029C YLR464WP0CX17 216 aa3.17□□□□□ -1.9
SMB1YER029C COX11P19516 300 aaKnown RBP3.17□□□□□ -1.9
SMB1YER029C APN1P22936 367 aa3.17□□□□□ -1.9
SMB1YER029C YPT10P38146 199 aa3.17□□□□□ -1.9
SMB1YER029C YEL076CP39971 216 aa3.17□□□□□ -1.9
SMB1YER029C EAF5P39995 279 aa3.17□□□□□ -1.9
SMB1YER029C BUD17P53727 317 aa3.17□□□□□ -1.9
SMB1YER029C MFM1Q02783 413 aa3.17□□□□□ -1.9
SMB1YER029C USA1Q03714 838 aa3.17□□□□□ -1.9
SMB1YER029C GEP3Q08622 556 aa3.17□□□□□ -1.9
SMB1YER029C YOR378WQ08902 515 aa3.17□□□□□ -1.9
SMB1YER029C VPS5Q92331 675 aa3.17□□□□□ -1.9
SMB1YER029C RPL7AP05737 244 aaKnown RBP3.16□□□□□ -1.9
SMB1YER029C ADE5,7P07244 802 aaKnown RBP3.16□□□□□ -1.9
SMB1YER029C VPS33P20795 691 aa3.16□□□□□ -1.9
SMB1YER029C DHR2P36009 735 aaPredicted RBP3.16□□□□□ -1.9
SMB1YER029C COQ6P53318 479 aa3.16□□□□□ -1.9
SMB1YER029C STP1Q00947 519 aa3.16□□□□□ -1.9
SMB1YER029C ECM38Q05902 660 aaPredicted RBP3.16□□□□□ -1.9
SMB1YER029C TRE2Q08693 809 aa3.16□□□□□ -1.9
SMB1YER029C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SMB1YER029C RTK1Q12100 620 aaPredicted RBP3.16□□□□□ -1.9
SMB1YER029C RPL7BQ12213 244 aaKnown RBP3.16□□□□□ -1.9
SMB1YER029C ZPS1Q12512 249 aa3.16□□□□□ -1.9
SMB1YER029C AAD3P25612 363 aa3.15□□□□□ -1.91
SMB1YER029C CAP1P28495 268 aaKnown RBP3.15□□□□□ -1.91
SMB1YER029C HOT13P36078 116 aa3.15□□□□□ -1.91
SMB1YER029C CCL1P37366 393 aa3.15□□□□□ -1.91
SMB1YER029C YJL193WP39542 402 aa3.15□□□□□ -1.91
SMB1YER029C YEL025CP39991 1188 aa3.15□□□□□ -1.91
SMB1YER029C PEA2P40091 420 aa3.15□□□□□ -1.91
SMB1YER029C MAD2P40958 196 aa3.15□□□□□ -1.91
SMB1YER029C THI6P41835 540 aa3.15□□□□□ -1.91
SMB1YER029C TAX4P47030 604 aa3.15□□□□□ -1.91
SMB1YER029C SAP4P53036 818 aa3.15□□□□□ -1.91
SMB1YER029C CWC2Q12046 339 aaPredicted RBP3.15□□□□□ -1.91
SMB1YER029C DIN7Q12086 430 aa3.15□□□□□ -1.91
SMB1YER029C AIM44Q99299 758 aa3.15□□□□□ -1.91
SMB1YER029C TUF1P02992 437 aaKnown RBP3.14□□□□□ -1.91
SMB1YER029C ARG1P22768 420 aa3.14□□□□□ -1.91
SMB1YER029C TSR4P25040 408 aa3.14□□□□□ -1.91
SMB1YER029C CWH43P25618 953 aa3.14□□□□□ -1.91
SMB1YER029C PLC1P32383 869 aa3.14□□□□□ -1.91
SMB1YER029C RIM4P38741 713 aa3.14□□□□□ -1.91
SMB1YER029C PIH1P38768 344 aa3.14□□□□□ -1.91
SMB1YER029C SQS1P53866 767 aaKnown RBP3.14□□□□□ -1.91
SMB1YER029C YNL092WP53934 400 aa3.14□□□□□ -1.91
SMB1YER029C YDL073WQ07454 984 aa3.14□□□□□ -1.91
SMB1YER029C PEX15Q08215 383 aa3.14□□□□□ -1.91
SMB1YER029C YPL216WQ08964 1102 aa3.14□□□□□ -1.91
SMB1YER029C PCL8Q08966 492 aa3.14□□□□□ -1.91
SMB1YER029C URA3P03962 267 aa3.13□□□□□ -1.91
SMB1YER029C PRP45P28004 379 aaPredicted RBP3.13□□□□□ -1.91
SMB1YER029C TFC4P33339 1025 aa3.13□□□□□ -1.91
SMB1YER029C ULP2P40537 1034 aaPredicted RBP3.13□□□□□ -1.91
SMB1YER029C YFL015CP43578 164 aa3.13□□□□□ -1.91
SMB1YER029C SPC105P53148 917 aa3.13□□□□□ -1.91
SMB1YER029C YNR071CP53757 342 aa3.13□□□□□ -1.91
SMB1YER029C SLX4Q12098 748 aa3.13□□□□□ -1.91
SMB1YER029C AI5_ALPHAQ9ZZX1 630 aa3.13□□□□□ -1.91
SMB1YER029C AQY1P0CD91 305 aa3.12□□□□□ -1.91
SMB1YER029C PCK1P10963 549 aa3.12□□□□□ -1.91
SMB1YER029C WHI2P12611 486 aa3.12□□□□□ -1.91
SMB1YER029C RNR3P21672 869 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms