RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C RPT3P33298 428 aaKnown RBP2.39□□□□□ -2.03
SPG3YDR504C YPT10P38146 199 aa2.39□□□□□ -2.03
SPG3YDR504C DOT6P40059 670 aaKnown RBP2.39□□□□□ -2.03
SPG3YDR504C YIL092WP40497 633 aa2.39□□□□□ -2.03
SPG3YDR504C SKP2P42843 763 aa2.39□□□□□ -2.03
SPG3YDR504C HOS2P53096 452 aaPredicted RBP2.39□□□□□ -2.03
SPG3YDR504C YMR034CQ05131 434 aaPredicted RBP2.39□□□□□ -2.03
SPG3YDR504C HRD3Q05787 833 aa2.39□□□□□ -2.03
SPG3YDR504C UBX3Q12229 455 aa2.39□□□□□ -2.03
SPG3YDR504C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SPG3YDR504C PRP22P24384 1145 aaKnown RBP2.38□□□□□ -2.03
SPG3YDR504C YJU2P28320 278 aaPredicted RBP2.38□□□□□ -2.03
SPG3YDR504C BUD8P41698 603 aa2.38□□□□□ -2.03
SPG3YDR504C AIM14P53109 570 aa2.38□□□□□ -2.03
SPG3YDR504C SPO1P53541 631 aa2.38□□□□□ -2.03
SPG3YDR504C FDC1Q03034 503 aa2.38□□□□□ -2.03
SPG3YDR504C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03 RIP-Chip
SPG3YDR504C GAL4P04386 881 aa2.37□□□□□ -2.03
SPG3YDR504C YKU70P32807 602 aa2.37□□□□□ -2.03
SPG3YDR504C BRN1P38170 754 aa2.37□□□□□ -2.03
SPG3YDR504C CRG1P38892 291 aaRIP-Chip data2.37□□□□□ -2.03not detected
SPG3YDR504C BEM4P39011 633 aa2.37□□□□□ -2.03
SPG3YDR504C YPS7Q06325 596 aa2.37□□□□□ -2.03
SPG3YDR504C ATX2Q12067 313 aa2.37□□□□□ -2.03
SPG3YDR504C MDM12Q92328 271 aa2.37□□□□□ -2.03
SPG3YDR504C SRD1P09007 221 aa2.36□□□□□ -2.03
SPG3YDR504C HMG1P12683 1054 aa2.36□□□□□ -2.03
SPG3YDR504C LOT5P34234 306 aa2.36□□□□□ -2.03
SPG3YDR504C YIL169CP40442 995 aa2.36□□□□□ -2.03
SPG3YDR504C SMA2Q04658 369 aa2.36□□□□□ -2.03
SPG3YDR504C MLH2Q07980 695 aa2.36□□□□□ -2.03
SPG3YDR504C TGS1Q12052 315 aa2.36□□□□□ -2.03
SPG3YDR504C BI2P03873 423 aa2.35□□□□□ -2.03
SPG3YDR504C ERR1P0CX10 437 aa2.35□□□□□ -2.03
SPG3YDR504C ERR2P0CX11 437 aa2.35□□□□□ -2.03
SPG3YDR504C MEF1P25039 761 aa2.35□□□□□ -2.03
SPG3YDR504C FTR1P40088 404 aa2.35□□□□□ -2.03
SPG3YDR504C PXA1P41909 870 aa2.35□□□□□ -2.03
SPG3YDR504C YLR407WQ06070 228 aa2.35□□□□□ -2.03
SPG3YDR504C ATG33Q06485 197 aa2.35□□□□□ -2.03
SPG3YDR504C CYK3Q07533 885 aa2.35□□□□□ -2.03
SPG3YDR504C HOP1P20050 605 aa2.34□□□□□ -2.03
SPG3YDR504C IMD2P38697 523 aaKnown RBP2.34□□□□□ -2.03
SPG3YDR504C DSS1P39112 969 aa2.34□□□□□ -2.03
SPG3YDR504C IMD3P50095 523 aaKnown RBP2.34□□□□□ -2.03
SPG3YDR504C YMR210WQ03649 449 aa2.34□□□□□ -2.03
SPG3YDR504C SNU56Q03782 492 aaKnown RBP2.34□□□□□ -2.03
SPG3YDR504C PPZ1P26570 692 aa2.33□□□□□ -2.04
SPG3YDR504C PRE4P30657 266 aa2.33□□□□□ -2.04
SPG3YDR504C CCL1P37366 393 aa2.33□□□□□ -2.04
SPG3YDR504C CDS1P38221 457 aa2.33□□□□□ -2.04
SPG3YDR504C DHH1P39517 506 aaKnown RBP2.33□□□□□ -2.04
SPG3YDR504C AHA1Q12449 350 aaKnown RBP2.33□□□□□ -2.04
SPG3YDR504C PNO1Q99216 274 aaKnown RBP2.33□□□□□ -2.04
SPG3YDR504C GSY1P23337 708 aa2.32□□□□□ -2.04
SPG3YDR504C DHR2P36009 735 aaPredicted RBP2.32□□□□□ -2.04
SPG3YDR504C YKR075CP36155 307 aa2.32□□□□□ -2.04
SPG3YDR504C SCO2P38072 301 aa2.32□□□□□ -2.04
SPG3YDR504C EXO84P38261 753 aa2.32□□□□□ -2.04
SPG3YDR504C ZAP1P47043 880 aa2.32□□□□□ -2.04
SPG3YDR504C CAP1P28495 268 aaKnown RBP2.31□□□□□ -2.04
SPG3YDR504C VRG4P40107 337 aa2.31□□□□□ -2.04
SPG3YDR504C SAD1P43589 448 aa2.31□□□□□ -2.04
SPG3YDR504C YJL049WP47048 450 aa2.31□□□□□ -2.04
SPG3YDR504C USA1Q03714 838 aa2.31□□□□□ -2.04
SPG3YDR504C STP4Q07351 490 aa2.31□□□□□ -2.04
SPG3YDR504C CET1O13297 549 aaPredicted RBP2.3□□□□□ -2.04
SPG3YDR504C YFL068WP0CX99 160 aa2.3□□□□□ -2.04
SPG3YDR504C YLL066W-AP0CY00 160 aa2.3□□□□□ -2.04
SPG3YDR504C YLL067W-AP0CY01 160 aa2.3□□□□□ -2.04
SPG3YDR504C MAK32P23060 363 aa2.3□□□□□ -2.04
SPG3YDR504C YEL025CP39991 1188 aa2.3□□□□□ -2.04
SPG3YDR504C DIG1Q03063 452 aaKnown RBP2.3□□□□□ -2.04
SPG3YDR504C HLR1Q04429 423 aa2.3□□□□□ -2.04
SPG3YDR504C EHT1P38295 451 aa2.29□□□□□ -2.04
SPG3YDR504C FTH1P38310 465 aa2.29□□□□□ -2.04
SPG3YDR504C PCM1P38628 557 aaKnown RBP2.29□□□□□ -2.04
SPG3YDR504C FAA2P39518 744 aa2.29□□□□□ -2.04
SPG3YDR504C CIN1P40987 1014 aa2.29□□□□□ -2.04
SPG3YDR504C PPN1Q04119 674 aa2.29□□□□□ -2.04
SPG3YDR504C ARR3Q06598 404 aa2.29□□□□□ -2.04
SPG3YDR504C PFA4Q12006 378 aa2.29□□□□□ -2.04
SPG3YDR504C GIN4Q12263 1142 aa2.29□□□□□ -2.04
SPG3YDR504C SAN1P22470 610 aa2.28□□□□□ -2.04
SPG3YDR504C PCL2P25693 308 aa2.28□□□□□ -2.04
SPG3YDR504C MAL31P38156 614 aa2.28□□□□□ -2.04
SPG3YDR504C TOM71P38825 639 aaKnown RBP2.28□□□□□ -2.04
SPG3YDR504C AZF1P41696 914 aa2.28□□□□□ -2.04
SPG3YDR504C ECM16Q04217 1267 aaKnown RBP2.28□□□□□ -2.04
SPG3YDR504C MNN1P39106 762 aa2.27□□□□□ -2.05
SPG3YDR504C YND1P40009 630 aa2.27□□□□□ -2.05
SPG3YDR504C AAC1P04710 309 aa2.26□□□□□ -2.05
SPG3YDR504C YPK1P12688 680 aaKnown RBP2.26□□□□□ -2.05
SPG3YDR504C LRO1P40345 661 aa2.26□□□□□ -2.05
SPG3YDR504C TAF4P50105 388 aa2.26□□□□□ -2.05
SPG3YDR504C VTC3Q02725 835 aa2.26□□□□□ -2.05
SPG3YDR504C RAD33Q04231 177 aa2.26□□□□□ -2.05
SPG3YDR504C RSA1Q08932 381 aa2.26□□□□□ -2.05
SPG3YDR504C ILS1P09436 1072 aaKnown RBP2.25□□□□□ -2.05
SPG3YDR504C PRP16P15938 1071 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms