RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	PSR1	Q07800	427 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	DIA2	Q08496	732 aa	Predicted RBP	5.17	□□□□□ -1.58
PAL1	YDR348C	SCM3	Q12334	223 aa		5.17	□□□□□ -1.58
PAL1	YDR348C	GCR1	P07261	785 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	RSR1	P13856	272 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	POL30	P15873	258 aa	Known RBP	5.16	□□□□□ -1.58
PAL1	YDR348C	EXO70	P19658	623 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	GSY1	P23337	708 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	RIT1	P23796	513 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	NPP1	P25353	742 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	RRT12	P25381	491 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	AAD3	P25612	363 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	CAP1	P28495	268 aa	Known RBP	5.16	□□□□□ -1.58
PAL1	YDR348C	HEM3	P28789	327 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	DGR2	P32330	852 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	SEC6	P32844	805 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	RCN1	P36054	211 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	SPC42	P36094	363 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	PAM1	P37304	830 aa	Known RBP	5.16	□□□□□ -1.58
PAL1	YDR348C	PFF1	P38244	976 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	SPC97	P38863	823 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	ALG2	P43636	503 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	BNA3	P47039	444 aa	Known RBP	5.16	□□□□□ -1.58
PAL1	YDR348C	ASE1	P50275	885 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	YGR035C	P53222	116 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	RAT1	Q02792	1006 aa	Known RBP	5.16	□□□□□ -1.58
PAL1	YDR348C	GPI17	Q04080	534 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	MYO5	Q04439	1219 aa	Known RBP	5.16	□□□□□ -1.58
PAL1	YDR348C	FMP42	Q04991	504 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	INM2	Q05533	292 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	YLR125W	Q12138	136 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	BBP1	Q12365	385 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	NHA1	Q99271	985 aa		5.16	□□□□□ -1.58
PAL1	YDR348C	CCP1	P00431	361 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	CMD1	P06787	147 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	TUB1	P09733	447 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	FAR1	P21268	830 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	MRPL25	P23369	157 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	MCM5	P29496	775 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	PRO3	P32263	286 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	GDA1	P32621	518 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	RPT5	P33297	434 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	CUE2	P36075	443 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	PDX3	P38075	228 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.58	not detected
PAL1	YDR348C	AST2	P39945	430 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	MET18	P40469	1032 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	SDS3	P40505	327 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	THI12	P42883	340 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	THI5	P43534	340 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	SWP82	P43554	623 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	LAM5	P43560	674 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	ROG3	P43602	733 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	THI11	P47183	340 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	YGL108C	P53139	140 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	COP1	P53622	1201 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	ASI2	P53895	289 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	DAK1	P54838	584 aa	Known RBP	5.15	□□□□□ -1.58
PAL1	YDR348C	SMP3	Q04174	516 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	BCP1	Q06338	283 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	THI13	Q07748	340 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	VHS3	Q08438	674 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	UIP4	Q08926	304 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	NTO1	Q12311	748 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	VCX1	Q99385	411 aa		5.15	□□□□□ -1.58
PAL1	YDR348C	REP1	P03871	373 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
PAL1	YDR348C	YEL076C-A	P0CX16	216 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	YLR464W	P0CX17	216 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	DBP5	P20449	482 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	SNT1	P25357	1226 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	ICL1	P28240	557 aa	Predicted RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	TPS2	P31688	896 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	PEX2	P32800	271 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	YKL023W	P36103	277 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	SET3	P36124	751 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	CCL1	P37366	393 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	MRPL16	P38064	232 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	TSC10	P38342	320 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	APE4	P38821	490 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	YEL076C	P39971	216 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	PRK1	P40494	810 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	MKT1	P40850	830 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	YJL055W	P47044	245 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	LIA1	P47120	325 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	ATP22	P50273	684 aa	Predicted RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	SKP1	P52286	194 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	RET3	P53600	189 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	YNR040W	P53736	256 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	DSE4	P53753	1117 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	CBK1	P53894	756 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	SWP1	Q02795	286 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	SRL4	Q03085	281 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	FIN1	Q03898	291 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	TY1A-MR1	Q04215	440 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	HPF1	Q05164	967 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	TOS4	Q06266	489 aa		5.14	□□□□□ -1.59
PAL1	YDR348C	RRP9	Q06506	573 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	SNX3	Q08826	162 aa	Known RBP	5.14	□□□□□ -1.59
PAL1	YDR348C	RKM1	Q08961	583 aa	Predicted RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms