RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	PCI8	P40512	444 aa		4.81	□□□□□ -1.64
RXT3	YDL076C	FAF1	P40546	346 aa	Predicted RBP	4.81	□□□□□ -1.64
RXT3	YDL076C	VID28	P40547	921 aa		4.81	□□□□□ -1.64
RXT3	YDL076C	YGL138C	P53122	345 aa		4.81	□□□□□ -1.64
RXT3	YDL076C	YDR514C	Q04408	483 aa		4.81	□□□□□ -1.64
RXT3	YDL076C	WHI4	Q07655	649 aa	Known RBP	4.81	□□□□□ -1.64
RXT3	YDL076C	RCL1	Q08096	367 aa	Predicted RBP	4.81	□□□□□ -1.64
RXT3	YDL076C	SLK19	Q08581	821 aa	Known RBP	4.81	□□□□□ -1.64
RXT3	YDL076C	YVC1	Q12324	675 aa		4.81	□□□□□ -1.64
RXT3	YDL076C	RIF1	P29539	1916 aa		4.81	□□□□□ -1.64
RXT3	YDL076C	FKS1	P38631	1876 aa	Known RBP	4.81	□□□□□ -1.64
RXT3	YDL076C	MPH2	P0CD99	609 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	MATALPHA2	P0CY08	210 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	HMLALPHA2	P0CY09	210 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	TCP1	P12612	559 aa	Known RBP	4.8	□□□□□ -1.64
RXT3	YDL076C	IMG2	P25642	146 aa	Predicted RBP	4.8	□□□□□ -1.64
RXT3	YDL076C	FUN30	P31380	1131 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	MTC2	P34246	357 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	YHL026C	P38740	315 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	YAP1801	P38856	637 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	GAA1	P39012	614 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	MGS1	P40151	587 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	MOB1	P40484	314 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	FIS1	P40515	155 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	GPD2	P41911	440 aa	Known RBP	4.8	□□□□□ -1.64
RXT3	YDL076C	BFA1	P47113	574 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	CTR1	P49573	406 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	ATP25	Q03153	612 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	GIS1	Q03833	894 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	RSC3	Q06639	885 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	REH1	Q06709	432 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	ESC8	Q08119	714 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	PSK2	Q08217	1101 aa		4.8	□□□□□ -1.64
RXT3	YDL076C	YOR059C	Q08448	450 aa	Known RBP	4.8	□□□□□ -1.64
RXT3	YDL076C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RXT3	YDL076C	FRS2	P15625	503 aa	Known RBP	4.79	□□□□□ -1.64
RXT3	YDL076C	CBP3	P21560	335 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	RFA1	P22336	621 aa	Known RBP	4.79	□□□□□ -1.64
RXT3	YDL076C	MBR1	P23493	339 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	SWI4	P25302	1093 aa	Known RBP	4.79	□□□□□ -1.64
RXT3	YDL076C	PCL2	P25693	308 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	ADK2	P26364	225 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	VPH1	P32563	840 aa	Known RBP	4.79	□□□□□ -1.64
RXT3	YDL076C	CSE2	P33308	149 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	LRG1	P35688	1017 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	UBP11	P36026	717 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	CCL1	P37366	393 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	YHL017W	P38745	532 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	SHE10	P53075	577 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	SDH1	Q00711	640 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	PNG1	Q02890	363 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	HFD1	Q04458	532 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	COQ9	Q05779	260 aa		4.79	□□□□□ -1.64
RXT3	YDL076C	SNF1	P06782	633 aa	Known RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	SAM35	P14693	329 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	SFL1	P20134	766 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	ADE2	P21264	571 aa	Known RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	DPH2	P32461	534 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	STB5	P38699	743 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	RPN10	P38886	268 aa	Known RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	NPP2	P39997	493 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	CAF16	P43569	289 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	EPL1	P43572	832 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	GPG1	P53130	126 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	NCS2	P53923	493 aa	Predicted RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	SFB2	P53953	876 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	CWC21	Q03375	135 aa	Known RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	COG8	Q04632	607 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	MRI1	Q06489	411 aa	Known RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	RSC58	Q07979	502 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	DNL4	Q08387	944 aa	Predicted RBP	4.78	□□□□□ -1.64
RXT3	YDL076C	SVS1	Q12254	260 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	NSI1	Q12457	570 aa		4.78	□□□□□ -1.64
RXT3	YDL076C	HSP82	P02829	709 aa	Known RBP	4.77	□□□□□ -1.65
RXT3	YDL076C	TUF1	P02992	437 aa	Known RBP	4.77	□□□□□ -1.65
RXT3	YDL076C	RNR2	P09938	399 aa	Known RBP	4.77	□□□□□ -1.65
RXT3	YDL076C	BET2	P20133	325 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	PPZ1	P26570	692 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	RPC82	P32349	654 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	PRP19	P32523	503 aa	Known RBP	4.77	□□□□□ -1.65
RXT3	YDL076C	TMT1	P32643	299 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	COT1	P32798	439 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	YFL052W	P43551	465 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
RXT3	YDL076C	YJR120W	P47157	116 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	PGA2	P53903	129 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	SNP1	Q00916	300 aa	Predicted RBP	4.77	□□□□□ -1.65
RXT3	YDL076C	MTQ2	Q03920	221 aa	Predicted RBP	4.77	□□□□□ -1.65
RXT3	YDL076C	TRE2	Q08693	809 aa		4.77	□□□□□ -1.65
RXT3	YDL076C	ATP1	P07251	545 aa	Known RBP	4.76	□□□□□ -1.65
RXT3	YDL076C	HMG2	P12684	1045 aa		4.76	□□□□□ -1.65
RXT3	YDL076C	RSA4	P25382	515 aa	Known RBP	4.76	□□□□□ -1.65
RXT3	YDL076C	PUP3	P25451	205 aa	Known RBP	4.76	□□□□□ -1.65
RXT3	YDL076C	HOG1	P32485	435 aa		4.76	□□□□□ -1.65
RXT3	YDL076C	AIM26	P32858	118 aa		4.76	□□□□□ -1.65
RXT3	YDL076C	MRX3	P38172	270 aa		4.76	□□□□□ -1.65
RXT3	YDL076C	UBP13	P38187	747 aa		4.76	□□□□□ -1.65
RXT3	YDL076C	STT3	P39007	718 aa	Known RBP	4.76	□□□□□ -1.65
RXT3	YDL076C	DOT6	P40059	670 aa	Known RBP	4.76	□□□□□ -1.65
RXT3	YDL076C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms