RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	ERG4	P25340	473 aa		3.86	□□□□□ -1.79
CMD1	YBR109C	HRR25	P29295	494 aa	Known RBP	3.86	□□□□□ -1.79
CMD1	YBR109C	EFT1	P32324	842 aa	Known RBP	3.86	□□□□□ -1.79
CMD1	YBR109C	MF(ALPHA)2	P32435	120 aa		3.86	□□□□□ -1.79
CMD1	YBR109C	BUD8	P41698	603 aa		3.86	□□□□□ -1.79
CMD1	YBR109C	DAS1	P47005	663 aa		3.86	□□□□□ -1.79
CMD1	YBR109C	BIT61	P47041	543 aa		3.86	□□□□□ -1.79
CMD1	YBR109C	LGE1	Q02796	332 aa	Known RBP	3.86	□□□□□ -1.79
CMD1	YBR109C	RGC1	Q06108	1083 aa	Known RBP	3.86	□□□□□ -1.79
CMD1	YBR109C	DNF3	Q12674	1656 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	PEX1	P24004	1043 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	PRD1	P25375	712 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	NIC96	P34077	839 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	KTR4	P38131	464 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	OPY1	P38271	328 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	FMO1	P38866	432 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	NUP60	P39705	539 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	FUN12	P39730	1002 aa	Known RBP	3.85	□□□□□ -1.79
CMD1	YBR109C	IRC5	P43610	853 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	UBA2	P52488	636 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	MET14	Q02196	202 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	VBA4	Q04602	768 aa	Known RBP	3.85	□□□□□ -1.79
CMD1	YBR109C	THI22	Q06490	572 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	AIM39	Q08223	395 aa		3.85	□□□□□ -1.79
CMD1	YBR109C	CWC2	Q12046	339 aa	Predicted RBP	3.85	□□□□□ -1.79
CMD1	YBR109C	YEF3	P16521	1044 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	DGR2	P32330	852 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	EBP2	P36049	427 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	SRP68	P38687	599 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	BCD1	P38772	366 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	CCT3	P39077	534 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	EAF5	P39995	279 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	PXA1	P41909	870 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	YJL163C	P46996	555 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	ENP2	P48234	707 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	TAF4	P50105	388 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	NSE5	Q03718	556 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	ADY4	Q05955	493 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	OMS1	Q06668	471 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	YLR040C	Q07988	224 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	DIA2	Q08496	732 aa	Predicted RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	IRC13	Q08630	104 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	FRE5	Q08908	694 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	LSP1	Q12230	341 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	NYV1	Q12255	253 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	POM34	Q12445	299 aa		3.84	□□□□□ -1.79
CMD1	YBR109C	RPO41	P13433	1351 aa	Known RBP	3.84	□□□□□ -1.79
CMD1	YBR109C	GAL1	P04385	528 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	YEL076C-A	P0CX16	216 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	YLR464W	P0CX17	216 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	ROX1	P25042	368 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	KCC4	P25389	1037 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	CUE2	P36075	443 aa	Known RBP	3.83	□□□□□ -1.8
CMD1	YBR109C	YEL076C	P39971	216 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	YIL092W	P40497	633 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	UBC11	P52492	156 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	PIP2	P52960	996 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	HOL1	P53389	586 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	MTD1	Q02046	320 aa	Known RBP	3.83	□□□□□ -1.8
CMD1	YBR109C	PPN1	Q04119	674 aa		3.83	□□□□□ -1.8
CMD1	YBR109C	QCR6	P00127	147 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	RPS9B	P05755	195 aa	Known RBP	3.82	□□□□□ -1.8
CMD1	YBR109C	PIF1	P07271	859 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	ALG7	P07286	448 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	PCT1	P13259	424 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	DAL5	P15365	543 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	PRP22	P24384	1145 aa	Known RBP	3.82	□□□□□ -1.8
CMD1	YBR109C	KIN82	P25341	720 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	PRE4	P30657	266 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	MVD1	P32377	396 aa	Known RBP	3.82	□□□□□ -1.8
CMD1	YBR109C	MTC7	P32633	139 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	YHR033W	P38690	423 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
CMD1	YBR109C	RRP8	P38961	392 aa	Known RBP	3.82	□□□□□ -1.8
CMD1	YBR109C	MAM1	P40065	302 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	PRM2	P40534	656 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	SPO1	P53541	631 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	CNM67	P53865	581 aa	Known RBP	3.82	□□□□□ -1.8
CMD1	YBR109C	RNT1	Q02555	471 aa		3.82	□□□□□ -1.8
CMD1	YBR109C	USO1	P25386	1790 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	EDE1	P34216	1381 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	SIR3	P06701	978 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	PPR1	P07272	904 aa	Predicted RBP	3.81	□□□□□ -1.8
CMD1	YBR109C	FEN2	P25621	512 aa	Known RBP	3.81	□□□□□ -1.8
CMD1	YBR109C	PTP2	P29461	750 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	BCS1	P32839	456 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	HIS7	P33734	552 aa	Known RBP	3.81	□□□□□ -1.8
CMD1	YBR109C	YKL133C	P36066	463 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	CDS1	P38221	457 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	SUL1	P38359	859 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	STL1	P39932	569 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	FMP52	P40008	231 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	YIL077C	P40508	320 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	TCB2	P48231	1178 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	PAN2	P53010	1115 aa	Predicted RBP	3.81	□□□□□ -1.8
CMD1	YBR109C	RIA1	P53893	1110 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	CEG1	Q01159	459 aa	Predicted RBP	3.81	□□□□□ -1.8
CMD1	YBR109C	MLC2	Q06580	163 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	NUR1	Q12066	484 aa		3.81	□□□□□ -1.8
CMD1	YBR109C	RAD50	P12753	1312 aa		3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms