RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	HMG2	P12684	1045 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	NAT1	P12945	854 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	MSB1	P21339	1137 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	PRE4	P30657	266 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	ERG3	P32353	365 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	SAC6	P32599	642 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	KAE1	P36132	386 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	FSH1	P38777	243 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	SIP4	P46954	829 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	PRP31	P49704	494 aa	Predicted RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	WHI4	Q07655	649 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	SGO1	Q08490	590 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	COX17	Q12287	69 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	ARG3	P05150	338 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	MET17	P06106	444 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	RPL19A	P0CX82	189 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	RPL19B	P0CX83	189 aa	Predicted RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	PCK1	P10963	549 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	ANP1	P32629	500 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	CTF13	P35203	478 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	OMA1	P36163	345 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	PTC7	P38797	343 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	CCT3	P39077	534 aa	Known RBP	4.67	□□□□□ -1.66
RKM3	YBR030W	YNL195C	P40168	261 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	YJR061W	P40355	935 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	CAB2	P40506	365 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	GTS1	P40956	396 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	CIR1	P42940	261 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	GSM1	P42950	618 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	YBP2	P53169	641 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	ASI2	P53895	289 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	ARG5,6	Q01217	863 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	FCP1	Q03254	732 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	RSM24	Q03976	319 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	ZRT2	Q12436	422 aa		4.67	□□□□□ -1.66
RKM3	YBR030W	PDX1	P16451	410 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	TPM1	P17536	199 aa	Known RBP	4.66	□□□□□ -1.66
RKM3	YBR030W	FMP10	P40098	244 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	MND2	P40577	368 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	POL31	P46957	487 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	TAH11	P47112	604 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	DUO1	P53168	247 aa	Known RBP	4.66	□□□□□ -1.66
RKM3	YBR030W	YMR155W	Q03795	547 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	HMO1	Q03973	246 aa	Known RBP	4.66	□□□□□ -1.66
RKM3	YBR030W	PPN1	Q04119	674 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
RKM3	YBR030W	SKM1	Q12469	655 aa		4.66	□□□□□ -1.66
RKM3	YBR030W	SPT7	P35177	1332 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	GCN4	P03069	281 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	TPK1	P06244	397 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	GCD1	P09032	578 aa	Predicted RBP	4.65	□□□□□ -1.66
RKM3	YBR030W	PRP4	P20053	465 aa	Known RBP	4.65	□□□□□ -1.66
RKM3	YBR030W	STE14	P32584	239 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	ATG19	P35193	415 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	CDS1	P38221	457 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	TOS1	P38288	455 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	CAJ1	P39101	391 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	ARF3	P40994	183 aa	RIP-Chip data	4.65	□□□□□ -1.66	not detected
RKM3	YBR030W	BIT61	P47041	543 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	YDL183C	P48569	320 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	MDR1	P53258	950 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	YSA1	Q01976	231 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	REC102	Q02721	264 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	SSY1	Q03770	852 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	VBA4	Q04602	768 aa	Known RBP	4.65	□□□□□ -1.66
RKM3	YBR030W	ICL2	Q12031	575 aa		4.65	□□□□□ -1.66
RKM3	YBR030W	SUI3	P09064	285 aa	Known RBP	4.64	□□□□□ -1.67
RKM3	YBR030W	ROX1	P25042	368 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	MAC1	P35192	417 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	SIC1	P38634	284 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	YHR112C	P38716	378 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	FOL2	P51601	243 aa	Known RBP	4.64	□□□□□ -1.67
RKM3	YBR030W	VPS75	P53853	264 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	MCM21	Q06675	368 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	CIR2	Q08822	631 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	UPC2	Q12151	913 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	ERG20	P08524	352 aa	Known RBP	4.64	□□□□□ -1.67
RKM3	YBR030W	ILS1	P09436	1072 aa	Known RBP	4.64	□□□□□ -1.67
RKM3	YBR030W	TUB3	P09734	445 aa	Known RBP	4.64	□□□□□ -1.67
RKM3	YBR030W	DBF4	P32325	704 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	MRP20	P32387	263 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	DPH2	P32461	534 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	MSS4	P38994	779 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	YEL025C	P39991	1188 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	MPP10	P47083	593 aa	Known RBP	4.64	□□□□□ -1.67
RKM3	YBR030W	TEL2	P53038	688 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	COG1	P53079	417 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	TRS31	Q03337	283 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	YDR131C	Q03899	556 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	ADY4	Q05955	493 aa		4.64	□□□□□ -1.67
RKM3	YBR030W	YLR415C	O13578	112 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	CYC7	P00045	113 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	TUB2	P02557	457 aa	Known RBP	4.63	□□□□□ -1.67
RKM3	YBR030W	RPB2	P08518	1224 aa	Known RBP	4.63	□□□□□ -1.67
RKM3	YBR030W	SED4	P25365	1065 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	KRR1	P25586	316 aa	Predicted RBP	4.63	□□□□□ -1.67
RKM3	YBR030W	PES4	P39684	611 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	JEM1	P40358	645 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	SPO22	P40511	975 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	URM1	P40554	99 aa	Predicted RBP	4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms