RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Bbof1Q3V079 533 aa16.8■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Znf526Q8BI66 675 aa16.8■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Prl7a2O54831 253 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 HalP35492 657 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Cep120Q7TSG1 988 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Tlr9Q9EQU3 1032 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Chd4Q6PDQ2 1915 aaKnown RBP16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Enc1O35709 589 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Rad23aP54726 363 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Cep112Q5PR68 954 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Agtpbp1Q641K1 1218 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Pms1Q8K119 917 aa16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Acot9Q9R0X4 439 aaKnown RBP16.79■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Tex13c2A0A0G2JGA3 530 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Tdo2P48776 406 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Trim6Q8BGE7 488 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Flad1Q8R123 492 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 TxlnbQ8VBT1 685 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 SdsQ8VBT2 327 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Prpf6Q91YR7 941 aaKnown RBP16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Gps2Q921N8 327 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Ankrd1Q9CR42 319 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Foxn2E9Q7L6 429 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 GclcP97494 637 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Mrps31Q61733 384 aaKnown RBP16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Terf2ipQ91VL8 393 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Lrrfip2Q91WK0 415 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 StrbpQ91WM1 672 aaKnown RBP16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Chmp3Q9CQ10 224 aa16.78■□□□□ 0.28
Ebf3-208ENSMUST00000210774 IkbkbO88351 757 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Irf6P97431 467 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Prpf38aQ4FK66 312 aaKnown RBP16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Vps54Q5SPW0 977 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Elf1Q60775 612 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Calcoco1Q8CGU1 691 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Srgap2Q91Z67 1071 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Pus3Q9JI38 481 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Orc1Q9Z1N2 840 aaKnown RBP16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Vstm4T1NXB5 319 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Scn4aQ9ER60 1841 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Cfap99A0A140LIX9 648 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Serpinb6Q60854 378 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Tc2nQ91XT6 489 aa16.77■□□□□ 0.28
Ebf3-208ENSMUST00000210774 Zbtb21E9Q444 1094 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Gm5624F6ZZG8 207 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Cacna2d1O08532 1103 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Myo1bP46735 1107 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Sdad1Q80UZ2 687 aaKnown RBP16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Larp6Q8BN59 492 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Q9CYI0 393 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Ccdc39Q9D5Y1 937 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 PigoQ9JJI6 1093 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Abcc10Q8R4P9 1501 aa16.77■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Ltbp4Q8K4G1 1666 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Fyb1O35601 819 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Fbxw10Q5SUS0 1030 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Prpf4bQ61136 1007 aaKnown RBP16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Gm10471E9Q1C7 252 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Hoxc9P09633 260 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Stim1P70302 685 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Dhx38Q80X98 1228 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Pip4k2bQ80XI4 416 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 CactinQ9CS00 772 aaKnown RBP16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Filip1Q9CS72 1211 aa16.76■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Pth1rP41593 591 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Epha2Q03145 977 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Tex11Q14AT2 947 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Fam107bQ3TGF2 131 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Phactr4Q501J7 694 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Ccdc181Q80ZU5 509 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Adcy3Q8VHH7 1145 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Erc1Q99MI1 1120 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Rrs1Q9CYH6 365 aaKnown RBP16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Naa16Q9DBB4 864 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Mst1rQ62190 1378 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Gcom1E9PZ54 550 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Neurod6P48986 337 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 MyzapQ3UIJ9 466 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Lmod1Q8BVA4 595 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 TatQ8QZR1 454 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Fam173bQ9D1Z3 247 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Scn7aB1AYL1 1681 aa16.75■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Spef2Q8C9J3 1734 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Pla2g4bP0C871 782 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Fkbp4P30416 458 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Krt86P97861 486 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 LyarQ08288 388 aaKnown RBP16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Sco1Q5SUC9 284 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Btbd11Q6GQW0 1109 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Trim66Q924W6 1242 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Dnajc10Q9DC23 793 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Tns3Q5SSZ5 1440 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Rsph10bE9PYQ0 876 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 ItgadQ3V0T4 1168 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Znf653Q6YND2 615 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 U2af1l4Q8BGJ9 220 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Tcp11l2Q8K1H7 517 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Alg3Q8K2A8 438 aa16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Ccdc47Q9D024 483 aaKnown RBP16.74■□□□□ 0.27
Ebf3-208ENSMUST00000210774 Adgrb1Q3UHD1 1582 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms