Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm25239-201ENSMUST00000174915 86 ntBASIC41.14■■■■■ 4.18
IkbkbO88351 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
IkbkbO88351 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
IkbkbO88351 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
IkbkbO88351 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
IkbkbO88351 Gm15042-201ENSMUST00000120212 883 ntBASIC36.07■■■■□ 3.36
IkbkbO88351 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.05■■■■□ 3.36
IkbkbO88351 Gm24109-201ENSMUST00000175489 103 ntBASIC35.59■■■■□ 3.29
IkbkbO88351 Gm15045-201ENSMUST00000117359 883 ntBASIC35.3■■■■□ 3.24
IkbkbO88351 Psd-208ENSMUST00000224556 2034 ntBASIC35.11■■■■□ 3.21
IkbkbO88351 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
IkbkbO88351 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
IkbkbO88351 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
IkbkbO88351 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
IkbkbO88351 Gm23366-201ENSMUST00000175022 89 ntBASIC34.36■■■■□ 3.09
IkbkbO88351 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
IkbkbO88351 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
IkbkbO88351 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
IkbkbO88351 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
IkbkbO88351 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.66■■■□□ 2.98
IkbkbO88351 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
IkbkbO88351 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
IkbkbO88351 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
IkbkbO88351 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
IkbkbO88351 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
IkbkbO88351 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
IkbkbO88351 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
IkbkbO88351 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
IkbkbO88351 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.14■■■□□ 2.9
IkbkbO88351 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
IkbkbO88351 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
IkbkbO88351 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
IkbkbO88351 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
IkbkbO88351 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.97■■■□□ 2.87
IkbkbO88351 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.91■■■□□ 2.86
IkbkbO88351 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
IkbkbO88351 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
IkbkbO88351 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.75■■■□□ 2.83
IkbkbO88351 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
IkbkbO88351 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
IkbkbO88351 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
IkbkbO88351 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
IkbkbO88351 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
IkbkbO88351 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
IkbkbO88351 Gm25238-201ENSMUST00000174914 89 ntBASIC32.44■■■□□ 2.78
IkbkbO88351 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.38■■■□□ 2.77
IkbkbO88351 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
IkbkbO88351 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.35■■■□□ 2.77
IkbkbO88351 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
IkbkbO88351 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
IkbkbO88351 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
IkbkbO88351 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
IkbkbO88351 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.99■■■□□ 2.71
IkbkbO88351 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
IkbkbO88351 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
IkbkbO88351 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
IkbkbO88351 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.75■■■□□ 2.67
IkbkbO88351 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.72■■■□□ 2.67
IkbkbO88351 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
IkbkbO88351 Gm27325-201ENSMUST00000175467 74 ntBASIC31.63■■■□□ 2.65
IkbkbO88351 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.6■■■□□ 2.65
IkbkbO88351 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
IkbkbO88351 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.56■■■□□ 2.64
IkbkbO88351 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
IkbkbO88351 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
IkbkbO88351 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
IkbkbO88351 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.43■■■□□ 2.62
IkbkbO88351 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
IkbkbO88351 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.33■■■□□ 2.61
IkbkbO88351 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
IkbkbO88351 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.28■■■□□ 2.6
IkbkbO88351 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
IkbkbO88351 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
IkbkbO88351 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.19■■■□□ 2.58
IkbkbO88351 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
IkbkbO88351 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
IkbkbO88351 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
IkbkbO88351 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.57
IkbkbO88351 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
IkbkbO88351 Gm25262-201ENSMUST00000174934 133 ntBASIC30.99■■■□□ 2.55
IkbkbO88351 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
IkbkbO88351 Rab21-202ENSMUST00000218831 843 ntBASIC30.96■■■□□ 2.55
IkbkbO88351 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
IkbkbO88351 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
IkbkbO88351 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
IkbkbO88351 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
IkbkbO88351 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
IkbkbO88351 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
IkbkbO88351 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
IkbkbO88351 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
IkbkbO88351 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.85■■■□□ 2.53
IkbkbO88351 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
IkbkbO88351 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
IkbkbO88351 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.78■■■□□ 2.52
IkbkbO88351 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
IkbkbO88351 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.74■■■□□ 2.51
IkbkbO88351 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
IkbkbO88351 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
IkbkbO88351 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
IkbkbO88351 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms