RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Lmod1Q8BVA4 595 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ufl1Q8CCJ3 793 aaKnown RBP12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 CrebrfQ8CDG5 640 aaKnown RBP12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Yeats4Q9CR11 227 aaKnown RBP12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 FliiQ9JJ28 1271 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Lama4P97927 1816 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Rgs12Q8CGE9 1381 aa12.72□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cyp2c23E9Q5K4 494 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Metap2O08663 478 aaKnown RBP12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 GabrdP22933 449 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Gm28047Q3US59 414 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Sra1Q80VJ2 232 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Bola3Q8CEI1 110 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tmem143Q8VD26 458 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Eaf2Q91ZD6 262 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 4930548H24RikQ9D496 437 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ifi35Q9D8C4 286 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Sil1Q9EPK6 465 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Dusp10Q9ESS0 483 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 IcoslgQ9JHJ8 322 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Clic4Q9QYB1 253 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Trip6Q9Z1Y4 480 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Stx1aO35526 288 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Snai1Q02085 264 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Washc4Q3UMB9 1173 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Cdkl5Q3UTQ8 938 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ube3cQ80U95 1083 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Tsen34Q8BMZ5 316 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ces1dQ8VCT4 565 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ccdc47Q9D024 483 aaKnown RBP12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 NgdnQ9DB96 315 aaKnown RBP12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Rcan1Q9JHG6 198 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Zkscan5Q9Z1D8 819 aa12.71□□□□□ -0.37
Ldb3-202ENSMUST00000022328 Ms4a1P19437 291 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 NapbP28663 298 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Mapk8ip1Q9WVI9 707 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Zscan29E9Q5B4 869 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Me1P06801 572 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Ccdc174Q3U155 467 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 VeztQ3ZK22 780 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Zc3h12cQ5DTV4 884 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Pram1Q6BCL1 675 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Slc44a1Q6X893 653 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Zfp397Q7TNK4 527 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 VmacQ8BP01 174 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 HdlbpQ8VDJ3 1268 aaKnown RBP12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Stk38Q91VJ4 465 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Rbm43Q99J64 343 aa12.7□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Nhsl1Q8CAF4 1587 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Naaladl2A0A0N4SUJ3 795 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Pramel3A2AHA7 463 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Gm7903A2AWL1 463 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 AV320801A2AWL3 467 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Ube4aE9Q735 1028 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Gm15023L7MUB4 467 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Sptlc2P97363 560 aaKnown RBP12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Znf496Q5SXI5 585 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Prdm4Q80V63 803 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 DymQ8CHY3 669 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Psrc1Q9D0P7 329 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Rps6ka4Q9Z2B9 773 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 1700029H14RikE9PY36 240 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Gnat2P50149 354 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Cplx2P84086 134 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Cnnm2Q3TWN3 875 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Prkag3Q8BGM7 489 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Slc39a11Q8BWY7 342 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Ulbp1Q8HWA3 334 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 CenpqQ9CPQ5 267 aa12.69□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Gm43638A0A0J9YU36 694 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 CrcpO35427 148 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Npy5rO70342 466 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Agtpbp1Q641K1 1218 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Hnrnpul1Q8VDM6 859 aaKnown RBP12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Mei1Q9D4I2 1268 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Scn11aQ9R053 1765 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Krt24A1L317 512 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Foxp1P58462 705 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Llgl2Q3TJ91 1027 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Ckap2Q3V1H1 664 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Olfm5Q8BU90 496 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Paf1Q8K2T8 535 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Sirt2Q8VDQ8 389 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Dpf1Q9QX66 387 aa12.68□□□□□ -0.38
Ldb3-202ENSMUST00000022328 FAM186AQ9D9R9 1790 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Tshz1Q5DTH5 1084 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Stag1Q9D3E6 1258 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Map7d2A2AG50 781 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Slc4a4O88343 1079 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Cd3dP04235 173 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Slitrk3Q810B9 980 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Acnat2Q8BGG9 420 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Ranbp6Q8BIV3 1105 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Hps6Q8BLY7 805 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Hps3Q91VB4 1002 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Nop2Q922K7 793 aaKnown RBP12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Vps33aQ9D2N9 598 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Syt10Q9R0N4 523 aa12.67□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Atp2b1G5E829 1220 aa12.66□□□□□ -0.38
Ldb3-202ENSMUST00000022328 Dhx40Q6PE54 779 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms