Protein–RNA interactions for Protein: Q810B9

Slitrk3, SLIT and NTRK-like protein 3, mousemouse

Predictions only

Length 980 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slitrk3Q810B9 Gm25239-201ENSMUST00000174915 86 ntBASIC42.68■■■■■ 4.42
Slitrk3Q810B9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
Slitrk3Q810B9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
Slitrk3Q810B9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Slitrk3Q810B9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Slitrk3Q810B9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.27■■■■□ 3.72
Slitrk3Q810B9 Gm15042-201ENSMUST00000120212 883 ntBASIC37.77■■■■□ 3.64
Slitrk3Q810B9 Gm15045-201ENSMUST00000117359 883 ntBASIC37.12■■■■□ 3.53
Slitrk3Q810B9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Slitrk3Q810B9 Gm24109-201ENSMUST00000175489 103 ntBASIC36.81■■■■□ 3.48
Slitrk3Q810B9 Psd-208ENSMUST00000224556 2034 ntBASIC36.78■■■■□ 3.48
Slitrk3Q810B9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Slitrk3Q810B9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.25■■■■□ 3.39
Slitrk3Q810B9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.22■■■■□ 3.39
Slitrk3Q810B9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Slitrk3Q810B9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.36
Slitrk3Q810B9 Gm23366-201ENSMUST00000175022 89 ntBASIC35.67■■■■□ 3.3
Slitrk3Q810B9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
Slitrk3Q810B9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Slitrk3Q810B9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Slitrk3Q810B9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
Slitrk3Q810B9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Slitrk3Q810B9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Slitrk3Q810B9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Slitrk3Q810B9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Slitrk3Q810B9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.36■■■■□ 3.25
Slitrk3Q810B9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.36■■■■□ 3.25
Slitrk3Q810B9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Slitrk3Q810B9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Slitrk3Q810B9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Slitrk3Q810B9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Slitrk3Q810B9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.89■■■■□ 3.18
Slitrk3Q810B9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
Slitrk3Q810B9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
Slitrk3Q810B9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Slitrk3Q810B9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.71■■■■□ 3.15
Slitrk3Q810B9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Slitrk3Q810B9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Slitrk3Q810B9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
Slitrk3Q810B9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Slitrk3Q810B9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.23■■■■□ 3.07
Slitrk3Q810B9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
Slitrk3Q810B9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.98■■■■□ 3.03
Slitrk3Q810B9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.96■■■■□ 3.03
Slitrk3Q810B9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Slitrk3Q810B9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Slitrk3Q810B9 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.81■■■■□ 3
Slitrk3Q810B9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Slitrk3Q810B9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Slitrk3Q810B9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Slitrk3Q810B9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Slitrk3Q810B9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Slitrk3Q810B9 Gm25238-201ENSMUST00000174914 89 ntBASIC33.58■■■□□ 2.97
Slitrk3Q810B9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Slitrk3Q810B9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.53■■■□□ 2.96
Slitrk3Q810B9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Slitrk3Q810B9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Slitrk3Q810B9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
Slitrk3Q810B9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.37■■■□□ 2.93
Slitrk3Q810B9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Slitrk3Q810B9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Slitrk3Q810B9 Gm27325-201ENSMUST00000175467 74 ntBASIC33.27■■■□□ 2.92
Slitrk3Q810B9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Slitrk3Q810B9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.26■■■□□ 2.91
Slitrk3Q810B9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Slitrk3Q810B9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.18■■■□□ 2.9
Slitrk3Q810B9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
Slitrk3Q810B9 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.13■■■□□ 2.89
Slitrk3Q810B9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.13■■■□□ 2.89
Slitrk3Q810B9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Slitrk3Q810B9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Slitrk3Q810B9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.05■■■□□ 2.88
Slitrk3Q810B9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Slitrk3Q810B9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
Slitrk3Q810B9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Slitrk3Q810B9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Slitrk3Q810B9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.75■■■□□ 2.83
Slitrk3Q810B9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Slitrk3Q810B9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.59■■■□□ 2.81
Slitrk3Q810B9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.57■■■□□ 2.8
Slitrk3Q810B9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.55■■■□□ 2.8
Slitrk3Q810B9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Slitrk3Q810B9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Slitrk3Q810B9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Slitrk3Q810B9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Slitrk3Q810B9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Slitrk3Q810B9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Slitrk3Q810B9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Slitrk3Q810B9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Slitrk3Q810B9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Slitrk3Q810B9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
Slitrk3Q810B9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Slitrk3Q810B9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
Slitrk3Q810B9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Slitrk3Q810B9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Slitrk3Q810B9 Rab21-202ENSMUST00000218831 843 ntBASIC32.26■■■□□ 2.75
Slitrk3Q810B9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Slitrk3Q810B9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Slitrk3Q810B9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.2■■■□□ 2.75
Slitrk3Q810B9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms