RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 PKIGQ9Y2B9 76 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 U3KQ87 197 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 HECTD4Q9Y4D8 3996 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 AHCTF1Q8WYP5 2266 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 PRKDCP78527 4128 aaKnown RBP0.09□□□□□ -2.4
CMC1-211ENST00000495428 HSPG2P98160 4391 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 SPENQ96T58 3664 aaKnown RBP0.09□□□□□ -2.4
CMC1-211ENST00000495428 NESP48681 1621 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 ASXL3Q9C0F0 2248 aa0.09□□□□□ -2.4
CMC1-211ENST00000495428 TGIF2-C20orf24A0A0A6YYL0 155 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 DPRXA6NFQ7 191 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 CCDC160A6NGH7 325 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 ZNF736B4DX44 427 aaPredicted RBP0.08□□□□□ -2.4
CMC1-211ENST00000495428 CLDN25C9JDP6 229 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 CCL25O15444 150 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 TGOLN2O43493 480 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 SULT1B1O43704 296 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 ISG15P05161 165 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 SNRPD2P62316 118 aaKnown RBP0.08□□□□□ -2.4
CMC1-211ENST00000495428 MPV17LQ2QL34 196 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 HIST2H3PS2Q5TEC6 136 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 HIST3H2BBQ8N257 126 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 C3orf56Q8N813 242 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 OR10J5Q8NHC4 309 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 TOMM6Q96B49 74 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 OPTNQ96CV9 577 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 PPP1R2P1Q96PQ5 205 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 ERGIC3Q9Y282 383 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 VPS13CQ709C8 3753 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 KIF13BQ9NQT8 1826 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 KNL1Q8NG31 2342 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 DNAH1Q9P2D7 4330 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 TET3O43151 1660 aa0.08□□□□□ -2.4
CMC1-211ENST00000495428 MTUS2Q5JR59 1369 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 SNRNP200O75643 2136 aaKnown RBP0.07□□□□□ -2.4
CMC1-211ENST00000495428 WRNQ14191 1432 aaPredicted RBP eCLIP0.07□□□□□ -2.4
CMC1-211ENST00000495428 EXOC1LA0A1B0GW35 172 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 A0A1W2PPM0 123 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 OR2J2O76002 312 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 HIST1H1TP22492 207 aaPredicted RBP0.07□□□□□ -2.4
CMC1-211ENST00000495428 CASQ1P31415 396 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 RPL5P46777 297 aaKnown RBP0.07□□□□□ -2.4
CMC1-211ENST00000495428 OR13D1Q8NGV5 346 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 PTH2Q96A98 100 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 SLC39A9Q9NUM3 307 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 RASL12Q9NYN1 266 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 USE1Q9NZ43 259 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 LSM5Q9Y4Y9 91 aaKnown RBP0.07□□□□□ -2.4
CMC1-211ENST00000495428 ZCCHC6Q5VYS8 1495 aaKnown RBP0.07□□□□□ -2.4
CMC1-211ENST00000495428 CACNA1CQ13936 2221 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 COL4A6Q14031 1691 aa0.07□□□□□ -2.4
CMC1-211ENST00000495428 SYNE1Q8NF91 8797 aaKnown RBP0.07□□□□□ -2.4
CMC1-211ENST00000495428 C9orf84Q5VXU9 1444 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 MRC2Q9UBG0 1479 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 TRAV9-1A0A075B6T8 112 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 DNAL4O96015 105 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 AP2S1P53680 142 aaPredicted RBP0.06□□□□□ -2.4
CMC1-211ENST00000495428 Q5VSD8 79 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 DEFB132Q7Z7B7 95 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 CLECL1Q8IZS7 167 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 GPR146Q96CH1 333 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 PRTFDC1Q9NRG1 225 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 EPDR1Q9UM22 224 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 HS3ST2Q9Y278 367 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 ATP6V1DQ9Y5K8 247 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 DENND4CQ5VZ89 1909 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 ALMS1Q8TCU4 4167 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 PCF11O94913 1555 aaKnown RBP0.06□□□□□ -2.4
CMC1-211ENST00000495428 DOCK3Q8IZD9 2030 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 SCN3AQ9NY46 2000 aa0.06□□□□□ -2.4
CMC1-211ENST00000495428 RIMS1Q86UR5 1692 aaKnown RBP0.05□□□□□ -2.4
CMC1-211ENST00000495428 BCL9LQ86UU0 1499 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 DCTN3O75935 186 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 OR2B3O76000 313 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 SPCS3P61009 180 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 PSG9Q00887 426 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 OR2F1Q13607 317 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 LINC01554Q52M75 96 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 C8orf74Q6P047 294 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 LPCAT3Q6P1A2 487 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 LCA10Q71F78 164 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 C20orf196Q8IYI0 205 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 ANKRD29Q8N6D5 301 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 TSPAN32Q96QS1 320 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 COMMD5Q9GZQ3 224 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 OR51V1Q9H2C8 321 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 TMEM56-RWDD3S4R434 201 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 MED12Q93074 2177 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 CASP8AP2Q9UKL3 1982 aa0.05□□□□□ -2.4
CMC1-211ENST00000495428 ABCA1O95477 2261 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 CHD1O14646 1710 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 AKAP6Q13023 2319 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 LAMC3Q9Y6N6 1575 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 PSMD12O00232 456 aaPredicted RBP0.04□□□□□ -2.4
CMC1-211ENST00000495428 IFNA10P01566 189 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 HIST1H1EP10412 219 aaKnown RBP0.04□□□□□ -2.4
CMC1-211ENST00000495428 CIRBPQ14011 172 aaKnown RBP0.04□□□□□ -2.4
CMC1-211ENST00000495428 CDKL4Q5MAI5 379 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 PATE1Q8WXA2 126 aa0.04□□□□□ -2.4
CMC1-211ENST00000495428 CFAP53Q96M91 514 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms