RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 NUDT10Q8NFP7 164 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 NUDT11Q96G61 164 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 OR10AG1Q8NH19 301 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 SLX1AQ9BQ83 275 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 BRCA2P51587 3418 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 CCDC168Q8NDH2 2452 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 FNDC10F2Z333 226 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 PRTN3P24158 256 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 ZNF833PQ6ZTB9 187 aa14.39□□□□□ -0.11
UBL3-201ENST00000380680 IGKV3-20P01619 116 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 SPTBN4Q9H254 2564 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 RNF151Q2KHN1 245 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 ZNF841Q6ZN19 808 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 OR4C5Q8NGB2 326 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 BPESC1Q9GZL8 116 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 AMBPP02760 352 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 UQCR10Q9UDW1 63 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 C15orf32Q32M92 178 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 LYPD6BQ8NI32 183 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 MAP1LC3AQ9H492 121 aa14.38□□□□□ -0.11
UBL3-201ENST00000380680 LAMA2P24043 3122 aaKnown RBP14.38□□□□□ -0.11
UBL3-201ENST00000380680 NUP210LQ5VU65 1888 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 TRAV8-1A0A0A6YYK1 113 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 M0R1W7 72 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 WT1-ASQ06250 92 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 KCNS1Q96KK3 526 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 GRNP28799 593 aaKnown RBP14.37□□□□□ -0.11
UBL3-201ENST00000380680 NMUP48645 174 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 TMEM97Q5BJF2 176 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 Q6ZPA2 131 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 NRN1Q9NPD7 142 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 PLXNB1O43157 2135 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 CENPVQ7Z7K6 275 aaPredicted RBP14.37□□□□□ -0.11
UBL3-201ENST00000380680 TPSG1Q9NRR2 321 aa14.37□□□□□ -0.11
UBL3-201ENST00000380680 A0A0G2JLM5 398 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 RPLP1P05386 114 aaKnown RBP14.36□□□□□ -0.11
UBL3-201ENST00000380680 RNF224P0DH78 156 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 MSMPQ1L6U9 139 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 PRR31Q5SQ13 230 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 BRD3OSQ6XYD6 125 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 GNB1LQ9BYB4 327 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 CBY3A6NI87 242 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 HINT1P49773 126 aaPredicted RBP14.36□□□□□ -0.11
UBL3-201ENST00000380680 MINOS1Q5TGZ0 78 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 MINOS1-NBL1R4GNA1 71 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 TSKUQ8WUA8 353 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 COL25A1Q9BXS0 654 aaPredicted RBP14.36□□□□□ -0.11
UBL3-201ENST00000380680 ZFP30Q9Y2G7 519 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 SOX21Q9Y651 276 aaPredicted RBP14.36□□□□□ -0.11
UBL3-201ENST00000380680 LHBP01229 141 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 TCRAP04437 139 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 JOSD1Q15040 202 aaPredicted RBP14.36□□□□□ -0.11
UBL3-201ENST00000380680 TMEM70Q9BUB7 260 aa14.36□□□□□ -0.11
UBL3-201ENST00000380680 OOSP1A8MZH6 123 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 RPL15P61313 204 aaKnown RBP14.35□□□□□ -0.11
UBL3-201ENST00000380680 COL5A1-AS1Q5SY13 56 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 TMEM256Q8N2U0 113 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 SH2D7A6NKC9 451 aaPredicted RBP14.35□□□□□ -0.11
UBL3-201ENST00000380680 PFN1P07737 140 aaKnown RBP14.35□□□□□ -0.11
UBL3-201ENST00000380680 GZMBP10144 247 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 PRELID3AQ96N28 172 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 PYY3Q5JQD4 70 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 REC114Q7Z4M0 266 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 CTSZQ9UBR2 303 aa14.35□□□□□ -0.11
UBL3-201ENST00000380680 TRBV20OR9-2A0A075B6H5 130 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 APOHP02749 345 aaPredicted RBP14.34□□□□□ -0.11
UBL3-201ENST00000380680 BEND2Q8NDZ0 799 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 DGAT2L7PQ6IED9 249 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 FER1L6-AS1Q8NA97 138 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 M0R381 172 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 KLK15Q9H2R5 256 aa14.34□□□□□ -0.11
UBL3-201ENST00000380680 MYO9AB2RTY4 2548 aa14.33□□□□□ -0.11
UBL3-201ENST00000380680 FABP5P3A8MUU1 101 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 CHD8Q9HCK8 2581 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 SHISA9B4DS77 424 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 M0R3E3 92 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 POU2AF1Q16633 256 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 Q6AWC8 147 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 SCGB1D4Q6XE38 83 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 C14orf144Q96I85 54 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 LY96Q9Y6Y9 160 aa14.33□□□□□ -0.12
UBL3-201ENST00000380680 NPIPB5A8MRT5 1133 aa14.32□□□□□ -0.12
UBL3-201ENST00000380680 KAAG1Q9UBP8 84 aa14.32□□□□□ -0.12
UBL3-201ENST00000380680 MYO18BQ8IUG5 2567 aa14.32□□□□□ -0.12
UBL3-201ENST00000380680 SAA4P35542 130 aa14.32□□□□□ -0.12
UBL3-201ENST00000380680 C18orf15Q96N68 181 aa14.32□□□□□ -0.12
UBL3-201ENST00000380680 PPIFP30405 207 aaKnown RBP14.31□□□□□ -0.12
UBL3-201ENST00000380680 CTAG1AP78358 180 aa14.31□□□□□ -0.12
UBL3-201ENST00000380680 ZNF324O75467 553 aaPredicted RBP14.31□□□□□ -0.12
UBL3-201ENST00000380680 SLC25A34Q6PIV7 304 aa14.31□□□□□ -0.12
UBL3-201ENST00000380680 IGLV2-14P01704 120 aa14.31□□□□□ -0.12
UBL3-201ENST00000380680 FAM159AQ6UWV7 190 aa14.31□□□□□ -0.12
UBL3-201ENST00000380680 VPS25Q9BRG1 176 aa14.31□□□□□ -0.12
UBL3-201ENST00000380680 SONP18583 2426 aaKnown RBP14.31□□□□□ -0.12
UBL3-201ENST00000380680 TRAV41A0A0B4J266 112 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 CD33P20138 364 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 ZNF114Q8NC26 417 aa14.3□□□□□ -0.12
UBL3-201ENST00000380680 ZMAT5Q9UDW3 170 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms