RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 UBE2MP61081 183 aaKnown RBP9.18□□□□□ -0.94
SMAD3-208ENST00000558827 LYZP61626 148 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 SPANXN5Q5MJ07 72 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 STHQ8IWL8 128 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 OR11H2Q8NH07 326 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 RARRES2Q99969 163 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 TP53TG1Q9Y2A0 90 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 ALMS1Q8TCU4 4167 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 DUXBA0A1W2PPF3 345 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 NDUFB6O95139 128 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 CD5P06127 495 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 PSMG4Q5JS54 123 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 LRTM2Q8N967 370 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
SMAD3-208ENST00000558827 HYDINQ4G0P3 5121 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 SYNGR2O43760 224 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 IL7P13232 177 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 GATA2P23769 480 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-208ENST00000558827 BTCP35070 178 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 GPX4P36969 197 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-208ENST00000558827 POLR2GP62487 172 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMAD3-208ENST00000558827 RAB11AP62491 216 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 C4orf46Q504U0 113 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 DCANP1Q8TF63 244 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 RNF125Q96EQ8 232 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 CACFD1Q9UGQ2 172 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 TMED3Q9Y3Q3 217 aa9.16□□□□□ -0.94
SMAD3-208ENST00000558827 TRAV2A0A0B4J234 112 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 HELTA6NFD8 242 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 NAP1L6A6NFF2 107 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 BUB3O43684 328 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 MED6O75586 246 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 CCNKO75909 580 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 JTBO76095 146 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 SCGB1D2O95969 90 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 OR4E1P0C645 316 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.94
SMAD3-208ENST00000558827 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 PPP1R14BQ96C90 147 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 RAB40CQ96S21 281 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 BATF3Q9NR55 127 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 FBXL17Q9UF56 701 aa9.15□□□□□ -0.94
SMAD3-208ENST00000558827 IGKV1OR2-108A0A075B7D4 117 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 CENPXA8MT69 81 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 FAM90A26D6RGX4 464 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 PLA2G10O15496 165 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
SMAD3-208ENST00000558827 SLC25A6P12236 298 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 C4BPBP20851 252 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 EIF2B2P49770 351 aaKnown RBP9.14□□□□□ -0.95
SMAD3-208ENST00000558827 TMEM182Q6ZP80 229 aaPredicted RBP9.14□□□□□ -0.95
SMAD3-208ENST00000558827 TRPT1Q86TN4 253 aaKnown RBP9.14□□□□□ -0.95
SMAD3-208ENST00000558827 LINC00052Q96N35 136 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 GSKIPQ9P0R6 139 aa9.14□□□□□ -0.95
SMAD3-208ENST00000558827 TRAV6A0A075B6T7 132 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 SMCO3A2RU48 225 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 SNRPGP15A8MWD9 76 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 CCSO14618 274 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 SSSCA1O60232 199 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 IFNA21P01568 189 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 FXYD7P58549 80 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 OR8G2PQ6IF36 304 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 COQ8AQ8NI60 647 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 DEDD2Q8WXF8 326 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 WDR12Q9GZL7 423 aaKnown RBP9.13□□□□□ -0.95
SMAD3-208ENST00000558827 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 PSENENQ9NZ42 101 aa9.13□□□□□ -0.95
SMAD3-208ENST00000558827 STRAPQ9Y3F4 350 aaKnown RBP9.13□□□□□ -0.95
SMAD3-208ENST00000558827 PIGBOS1A0A0B4J2F0 54 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 LY6G6CO95867 125 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 ORM2P19652 201 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 AP2S1P53680 142 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 RRAS2P62070 204 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 RPP30P78346 268 aaKnown RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 ID3Q02535 119 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 AKR1C1Q04828 323 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 CEMP1Q6PRD7 247 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 ACOT7LQ6ZUV0 252 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 GATAD1Q8WUU5 269 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 PHLDA1Q8WV24 401 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
SMAD3-208ENST00000558827 TRGV9Q99603 122 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 DOK5Q9P104 306 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 XCL2Q9UBD3 114 aa9.12□□□□□ -0.95
SMAD3-208ENST00000558827 A6NHS1 94 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 PRSS46E5RG02 174 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 LYRM1O43325 122 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 METTL15P1P0C7V9 234 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 PRB4P10163 310 aaPredicted RBP9.11□□□□□ -0.95
SMAD3-208ENST00000558827 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
SMAD3-208ENST00000558827 GDF5OSQ5U4N7 250 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 OR8I2Q8N0Y5 310 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 THAP8Q8NA92 274 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 OR4D5Q8NGN0 318 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms