RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 SMIM9A6NGZ8 99 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 TCRBP04435 133 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 SRP14P37108 136 aaKnown RBP0.83□□□□□ -2.28
CCDC7-207ENST00000535327 FAM74A1Q5RGS3 127 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 CLECL1Q8IZS7 167 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 C12orf45Q8N5I9 185 aaPredicted RBP0.83□□□□□ -2.28
CCDC7-207ENST00000535327 AMELYQ99218 206 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 BCL2L10Q9HD36 194 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 UQCC1Q9NVA1 299 aa0.83□□□□□ -2.28
CCDC7-207ENST00000535327 LAMA4Q16363 1823 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 PIK3C2GO75747 1445 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 OBSL1O75147 1896 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 CDKN2CP42773 168 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 LSM6P62312 80 aaKnown RBP0.82□□□□□ -2.28
CCDC7-207ENST00000535327 RANP62826 216 aaKnown RBP0.82□□□□□ -2.28
CCDC7-207ENST00000535327 DEFB113Q30KQ7 82 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 TMEM254Q8TBM7 123 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 WFDC5Q8TCV5 224 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 KIFC1Q9BW19 673 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 ADGRB2O60241 1585 aa0.82□□□□□ -2.28
CCDC7-207ENST00000535327 MYH7BA7E2Y1 1941 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 MCM3APO60318 1980 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 PRB4P10163 310 aaPredicted RBP0.81□□□□□ -2.28
CCDC7-207ENST00000535327 ZNF25P17030 456 aaPredicted RBP0.81□□□□□ -2.28
CCDC7-207ENST00000535327 SLC30A7Q8NEW0 376 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 GNPDA2Q8TDQ7 276 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 SLAMF6Q96DU3 332 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 YPEL2Q96QA6 119 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 LINC00467Q9BRT7 94 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 RNASE7Q9H1E1 156 aaKnown RBP0.81□□□□□ -2.28
CCDC7-207ENST00000535327 HEATR1Q9H583 2144 aaKnown RBP0.81□□□□□ -2.28
CCDC7-207ENST00000535327 NMNAT1Q9HAN9 279 aaPredicted RBP0.81□□□□□ -2.28
CCDC7-207ENST00000535327 SLC22A13Q9Y226 551 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 SCN8AQ9UQD0 1980 aa0.81□□□□□ -2.28
CCDC7-207ENST00000535327 KIF1BO60333 1816 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 TRGV10A0A0A0MS01 117 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 TMEM114B3SHH9 223 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 NCR3O14931 201 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 HAND1O96004 215 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 ERP29P30040 261 aaKnown RBP0.8□□□□□ -2.28
CCDC7-207ENST00000535327 OR52L1Q8NGH7 329 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 OR2T35Q8NGX2 323 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 ADAT3Q96EY9 351 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-207ENST00000535327 GPER1Q99527 375 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 PRADC1Q9BSG0 188 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 IDI2-AS1Q9NZ38 188 aa0.8□□□□□ -2.28
CCDC7-207ENST00000535327 CHD3Q12873 2000 aaKnown RBP0.8□□□□□ -2.28
CCDC7-207ENST00000535327 KIAA1549Q9HCM3 1950 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 PEAK1Q9H792 1746 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 OR7C1O76099 320 aaPredicted RBP0.79□□□□□ -2.28
CCDC7-207ENST00000535327 GADD45GO95257 159 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 DNAL4O96015 105 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 DHFRP00374 187 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 KRR1Q13601 381 aaKnown RBP0.79□□□□□ -2.28
CCDC7-207ENST00000535327 AKIRIN2Q53H80 203 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 C2orf82Q6UX34 121 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 ST6GALNAC3Q8NDV1 305 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 MNS1Q8NEH6 495 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 SIGMAR1Q99720 223 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 UBAP1Q9NZ09 502 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 TMEM14CQ9P0S9 112 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 CASP8AP2Q9UKL3 1982 aa0.79□□□□□ -2.28
CCDC7-207ENST00000535327 ZFC3H1O60293 1989 aaKnown RBP0.78□□□□□ -2.28
CCDC7-207ENST00000535327 DEFA3P59666 94 aa0.78□□□□□ -2.28
CCDC7-207ENST00000535327 DYNLT1P63172 113 aa0.78□□□□□ -2.28
CCDC7-207ENST00000535327 CCL7P80098 99 aa0.78□□□□□ -2.28
CCDC7-207ENST00000535327 GKN2Q86XP6 184 aa0.78□□□□□ -2.28
CCDC7-207ENST00000535327 FMN1Q68DA7 1419 aa0.78□□□□□ -2.28
CCDC7-207ENST00000535327 MYO18AQ92614 2054 aaKnown RBP0.77□□□□□ -2.29
CCDC7-207ENST00000535327 ASCC3Q8N3C0 2202 aaKnown RBP0.77□□□□□ -2.29
CCDC7-207ENST00000535327 TCRBV4S1A1TA0A5B7 111 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 CCL16O15467 120 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 TIMM17BO60830 172 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 PIGPP57054 158 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 PSG9Q00887 426 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 MYL5Q02045 173 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 LIN52Q52LA3 116 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 BCL2L15Q5TBC7 163 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 PATE1Q8WXA2 126 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 TP53RKQ96S44 253 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 TMEM133Q9H2Q1 129 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 PARVBQ9HBI1 364 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 KDM6AO15550 1401 aaPredicted RBP0.77□□□□□ -2.29
CCDC7-207ENST00000535327 RIMBP3CA6NJZ7 1639 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 RIMBP3BA6NNM3 1639 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 RIMBP3Q9UFD9 1639 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 CNTRLQ7Z7A1 2325 aa0.77□□□□□ -2.29
CCDC7-207ENST00000535327 ARHGEF28Q8N1W1 1705 aaKnown RBP0.76□□□□□ -2.29
CCDC7-207ENST00000535327 CCDC144AA2RUR9 1427 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 TNS3Q68CZ2 1445 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 TRBV6-4A0A1B0GX49 114 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 A0A1W2PPM0 123 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 A8MWV9 139 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 CCL25O15444 150 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 SRIP30626 198 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 MYL6P60660 151 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 RRN3P1Q2M238 152 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 OR11H6Q8NGC7 330 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 TMEM70Q9BUB7 260 aa0.76□□□□□ -2.29
CCDC7-207ENST00000535327 IMUPQ9GZP8 106 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms