RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, human

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM50A-204	ENST00000478509	RNF183	Q96D59	192 aa		11.14	□□□□□ -0.63
FAM50A-204	ENST00000478509	TMED3	Q9Y3Q3	217 aa		11.14	□□□□□ -0.63
FAM50A-204	ENST00000478509	LCE6A	A0A183	80 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509		K7EQG2	157 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	CA1	P00915	261 aa	Predicted RBP	11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	ZNF90	Q03938	601 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	DHRS2	Q13268	280 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	GAMT	Q14353	236 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	C16orf54	Q6UWD8	224 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	IL17D	Q8TAD2	202 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	GLMP	Q8WWB7	406 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	C7orf50	Q9BRJ6	194 aa	Known RBP	11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	CSTL1	Q9H114	145 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	TP53TG1	Q9Y2A0	90 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	ALMS1	Q8TCU4	4167 aa		11.13	□□□□□ -0.63
FAM50A-204	ENST00000478509	IGKV1D-37	A0A075B6S9	117 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	TRAV2	A0A0B4J234	112 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	CXorf65	A6NEN9	183 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	KNCN	A6PVL3	124 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	CENPX	A8MT69	81 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	SYNGR2	O43760	224 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	MED6	O75586	246 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	OR4E1	P0C645	316 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	SLC25A6	P12236	298 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	UBE2M	P61081	183 aa	Known RBP	11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	LYZ	P61626	148 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	RAB11A	P62491	216 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	OR2F1	Q13607	317 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	C4orf46	Q504U0	113 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	STH	Q8IWL8	128 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	RNF125	Q96EQ8	232 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	WDR12	Q9GZL7	423 aa	Known RBP	11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	TBC1D24	Q9ULP9	559 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509		U3KQE9	123 aa		11.12	□□□□□ -0.63
FAM50A-204	ENST00000478509	FAM90A26	D6RGX4	464 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	EIF2B2	P49770	351 aa	Known RBP	11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	IFITM3	Q01628	133 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	ZNF846	Q147U1	533 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	SPANXN5	Q5MJ07	72 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	GSG1L	Q6UXU4	331 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	COQ8A	Q8NI60	647 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	DCANP1	Q8TF63	244 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	DNAH1	Q9P2D7	4330 aa		11.11	□□□□□ -0.63
FAM50A-204	ENST00000478509	HELT	A6NFD8	242 aa		11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	SCGB1D2	O95969	90 aa		11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	GPX4	P36969	197 aa	Predicted RBP	11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	POLR2G	P62487	172 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	PSMG4	Q5JS54	123 aa		11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	ACTL10	Q5JWF8	245 aa		11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	SIGLEC15	Q6ZMC9	328 aa		11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	CIB3	Q96Q77	187 aa	Predicted RBP	11.1	□□□□□ -0.63
FAM50A-204	ENST00000478509	LYRM1	O43325	122 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	BUB3	O43684	328 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	SSSCA1	O60232	199 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	UPK1B	O75841	260 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	ATP5I	P56385	69 aa	Predicted RBP	11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	OR11H2	Q8NH07	326 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	PPP1R14B	Q96C90	147 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	C20orf85	Q9H1P6	137 aa		11.09	□□□□□ -0.63
FAM50A-204	ENST00000478509	IGKV1OR2-108	A0A075B7D4	117 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	DEFB4A	O15263	64 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	IFNA21	P01568	189 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	C4BPB	P20851	252 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	RPP30	P78346	268 aa	Known RBP	11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	AKR1C1	Q04828	323 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	ASAH1	Q13510	395 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	ACOT7L	Q6ZUV0	252 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	RARRES2	Q99969	163 aa		11.08	□□□□□ -0.64
FAM50A-204	ENST00000478509	TRAV6	A0A075B6T7	132 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	SMCO3	A2RU48	225 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	PRSS46	E5RG02	174 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	JTB	O76095	146 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	NKX2-1	P43699	371 aa	Predicted RBP	11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	AP2S1	P53680	142 aa	Predicted RBP	11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	TRPT1	Q86TN4	253 aa	Known RBP	11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	OR4D5	Q8NGN0	318 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	TRGV9	Q99603	122 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	NRN1	Q9NPD7	142 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	CLEC5A	Q9NY25	188 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	PSENEN	Q9NZ42	101 aa		11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	STRAP	Q9Y3F4	350 aa	Known RBP	11.07	□□□□□ -0.64
FAM50A-204	ENST00000478509	CCS	O14618	274 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	CCNK	O75909	580 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	FABP1	P07148	127 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	GATA2	P23769	480 aa	Predicted RBP	11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	DEFB1	P60022	68 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	IAH1	Q2TAA2	248 aa	Predicted RBP	11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	OR8G2P	Q6IF36	304 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	THAP8	Q8NA92	274 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	GATAD1	Q8WUU5	269 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	GSKIP	Q9P0R6	139 aa		11.06	□□□□□ -0.64
FAM50A-204	ENST00000478509	SNRPGP15	A8MWD9	76 aa		11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	NUP62	P37198	522 aa	Predicted RBP	11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	RRAS2	P62070	204 aa	Predicted RBP	11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	SNRPD3	P62318	126 aa	Known RBP	11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	ID3	Q02535	119 aa		11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	TMEM217	Q8N7C4	229 aa		11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	RAB40C	Q96S21	281 aa		11.05	□□□□□ -0.64
FAM50A-204	ENST00000478509	SLC25A22	Q9H936	323 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms