RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MTUS2Q5JR59 1369 aa0.26□□□□□ -2.37
SMC4-227ENST00000497984 WRNQ14191 1432 aaPredicted RBP eCLIP0.26□□□□□ -2.37
SMC4-227ENST00000497984 ADGRB2O60241 1585 aa0.26□□□□□ -2.37
SMC4-227ENST00000497984 PTPRSQ13332 1948 aa0.26□□□□□ -2.37
SMC4-227ENST00000497984 COL6A3P12111 3177 aa0.26□□□□□ -2.37
SMC4-227ENST00000497984 MAP3K5Q99683 1374 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.25□□□□□ -2.37
SMC4-227ENST00000497984 TRAV3A0A0B4J244 114 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 PSMD12O00232 456 aaPredicted RBP0.25□□□□□ -2.37
SMC4-227ENST00000497984 TNNC2P02585 160 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 BAALC-AS2P0C853 105 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 HIST1H1EP10412 219 aaKnown RBP0.25□□□□□ -2.37
SMC4-227ENST00000497984 SPCS3P61009 180 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 HIST3H3Q16695 136 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 LPCAT3Q6P1A2 487 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 C20orf196Q8IYI0 205 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 HIST3H2BBQ8N257 126 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 ANKRD29Q8N6D5 301 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 TSPAN32Q96QS1 320 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 AMELYQ99218 206 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 SLC39A9Q9NUM3 307 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 ERGIC3Q9Y282 383 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 HEATR5BQ9P2D3 2071 aa0.25□□□□□ -2.37
SMC4-227ENST00000497984 TRAV9-1A0A075B6T8 112 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 OR2J2O76002 312 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 TCL1BO95988 128 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 IFNA10P01566 189 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 IFNA5P01569 189 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 ZNF25P17030 456 aaPredicted RBP0.24□□□□□ -2.37
SMC4-227ENST00000497984 COTL1Q14019 142 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 ACOT6Q3I5F7 207 aaPredicted RBP0.24□□□□□ -2.37
SMC4-227ENST00000497984 C1orf137Q5JT78 98 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 OR13D1Q8NGV5 346 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 OR10J5Q8NHC4 309 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 DDI1Q8WTU0 396 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 OR52E6Q96RD3 313 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 MRPS26Q9BYN8 205 aaKnown RBP0.24□□□□□ -2.37
SMC4-227ENST00000497984 COMMD5Q9GZQ3 224 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 CDC42SE1Q9NRR8 79 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 ACER3Q9NUN7 267 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 MRPL27Q9P0M9 148 aaKnown RBP0.24□□□□□ -2.37
SMC4-227ENST00000497984 GUCA1BQ9UMX6 200 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 TMEM56-RWDD3S4R434 201 aa0.24□□□□□ -2.37
SMC4-227ENST00000497984 NUP155O75694 1391 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 PCLOQ9Y6V0 5065 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 TRAV26-2A0A0B4J265 109 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 ZNF736B4DX44 427 aaPredicted RBP0.23□□□□□ -2.37
SMC4-227ENST00000497984 SULT1B1O43704 296 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 CHP2O43745 196 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 OR2B3O76000 313 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 CD79AP11912 226 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 NKX2-5P52952 324 aaPredicted RBP0.23□□□□□ -2.37
SMC4-227ENST00000497984 PSME3P61289 254 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 LINC01554Q52M75 96 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 SPRNQ5BIV9 151 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 SOSTDC1Q6X4U4 206 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 C3orf56Q8N813 242 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 OSTCQ9NRP0 149 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 HS3ST2Q9Y278 367 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 USP24Q9UPU5 2620 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 NCOA6Q14686 2063 aaPredicted RBP0.23□□□□□ -2.37
SMC4-227ENST00000497984 HECW2Q9P2P5 1572 aa0.23□□□□□ -2.37
SMC4-227ENST00000497984 SNAPC4Q5SXM2 1469 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 ROBO3Q96MS0 1386 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 FAM236DA0A1B0GTK5 79 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 CCDC160A6NGH7 325 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 OR4C46A6NHA9 309 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 CRYZL1O95825 349 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 SMIM10L2AP0DMW4 78 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 SMIM10L2BP0DMW5 78 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 FAM236CP0DP71 79 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 MPV17LQ2QL34 196 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 SPOPLQ6IQ16 392 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 TEX261Q6UWH6 196 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 GPR146Q96CH1 333 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 C20orf27Q9GZN8 174 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 DCSTAMPQ9H295 470 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 OR51V1Q9H2C8 321 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 RASL12Q9NYN1 266 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 U3KQ87 197 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 GREB1Q4ZG55 1949 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 ALPK2Q86TB3 2170 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 UBR4Q5T4S7 5183 aa0.22□□□□□ -2.37
SMC4-227ENST00000497984 COL1A1P02452 1464 aaPredicted RBP0.22□□□□□ -2.37
SMC4-227ENST00000497984 ANKHD1Q8IWZ3 2542 aaKnown RBP0.21□□□□□ -2.38
SMC4-227ENST00000497984 AHSA1O95433 338 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 IFNA16P05015 189 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 SULT1A1P50225 295 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 MAGOHP61326 146 aaKnown RBP0.21□□□□□ -2.38
SMC4-227ENST00000497984 BORCS5Q969J3 196 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 TMEM70Q9BUB7 260 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 PARD6GQ9BYG4 376 aaPredicted RBP0.21□□□□□ -2.38
SMC4-227ENST00000497984 UBAP1Q9NZ09 502 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 EPDR1Q9UM22 224 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 V9GYY5 206 aaPredicted RBP0.21□□□□□ -2.38
SMC4-227ENST00000497984 NEO1Q92859 1461 aa0.21□□□□□ -2.38
SMC4-227ENST00000497984 HECW1Q76N89 1606 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 MAST2Q6P0Q8 1798 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 CLDN25C9JDP6 229 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 NCR3O14931 201 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms