RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ATP5IP56385 69 aaPredicted RBP15.04■□□□□ -0
PDLIM4-201ENST00000253754 HLA-DRB5Q30154 266 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 VMA21Q3ZAQ7 101 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 RUSC1-AS1Q66K80 236 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 HIST3H2BBQ8N257 126 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 OR2T10Q8NGZ9 312 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 OCC1Q8TAD7 63 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 TXNDC17Q9BRA2 123 aa15.04■□□□□ -0
PDLIM4-201ENST00000253754 PLXNB1O43157 2135 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 DOPEY1Q5JWR5 2465 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 A0A1W2PPR1 153 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 TGOLN2O43493 480 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 SFRP2Q96HF1 295 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 TRAV5A0A0B4J249 113 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 INS-IGF2F8WCM5 200 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 GGCTO75223 188 aaKnown RBP15.03■□□□□ -0
PDLIM4-201ENST00000253754 MT-CO2P00403 227 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 IGLV1-47P01700 117 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 MC5RP33032 325 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 LGALS4P56470 323 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 HCP5Q6MZN7 132 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 NPIPB3Q92617 1050 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 CBLN4Q9NTU7 201 aa15.03■□□□□ -0
PDLIM4-201ENST00000253754 K7EN84 100 aa15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 OR5G3P0C626 314 aa15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 IL3RAP26951 378 aa15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 SRP14P37108 136 aaKnown RBP15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 ZNF90Q03938 601 aa15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 PRSS8Q16651 343 aa15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 CACNG8Q8WXS5 425 aa15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 GAR1Q9NY12 217 aaKnown RBP15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 TECRQ9NZ01 308 aaKnown RBP15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 ASH1LQ9NR48 2969 aaKnown RBP15.02□□□□□ -0.01
PDLIM4-201ENST00000253754 PPIAL4CA0A0B4J2A2 164 aa15.01□□□□□ -0.01
PDLIM4-201ENST00000253754 A0A0U1RQK1 487 aa15.01□□□□□ -0.01
PDLIM4-201ENST00000253754 PPIAL4GP0DN37 164 aa15.01□□□□□ -0.01
PDLIM4-201ENST00000253754 GPX4P36969 197 aaPredicted RBP15.01□□□□□ -0.01
PDLIM4-201ENST00000253754 CELSR2Q9HCU4 2923 aa15.01□□□□□ -0.01
PDLIM4-201ENST00000253754 IGHV1-3A0A0C4DH29 117 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 PSMB11A5LHX3 300 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 BUB1B-PAK6H3BSN5 160 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 CD99P14209 185 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 AREGP15514 252 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 S100A2P29034 98 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 PYY3Q5JQD4 70 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 CDPF1Q6NVV7 123 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 OR10D4PQ8NGN7 298 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 IGFBPL1Q8WX77 278 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 C11orf52Q96A22 123 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 CLEC7AQ9BXN2 247 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 MAP1AP78559 2803 aaPredicted RBP15□□□□□ -0.01
PDLIM4-201ENST00000253754 GCN1Q92616 2671 aaKnown RBP15□□□□□ -0.01
PDLIM4-201ENST00000253754 IGKV1D-37A0A075B6S9 117 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 MDFIC2A0A1B0GVS7 189 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 IGLC7A0M8Q6 106 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 GGTLC3B5MD39 225 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 CRYBB3P26998 211 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 TNXAQ16473 311 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 KCNIP4Q6PIL6 250 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 UHRF2Q96PU4 802 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 SLC25A33Q9BSK2 321 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 RAB1BQ9H0U4 201 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 ONECUT1Q9UBC0 465 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 MIOXQ9UGB7 285 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 INSIG2Q9Y5U4 225 aa15□□□□□ -0.01
PDLIM4-201ENST00000253754 FABP4P15090 132 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 LGALS7P47929 136 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 PRRX1P54821 245 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 MFAP2P55001 183 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 C11orf71Q6IPW1 123 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 RNASEH2CQ8TDP1 164 aaKnown RBP14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 SLC25A2Q9BXI2 301 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 IGHV3-21A0A0B4J1V1 117 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 C22orf46C9J442 243 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 TEX38Q6PEX7 206 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 SGMS2Q8NHU3 365 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 TMEM167BQ9NRX6 74 aa14.99□□□□□ -0.01
PDLIM4-201ENST00000253754 VPS13CQ709C8 3753 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 ELOA3CA0A087WX78 387 aaPredicted RBP14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 SNRPCP09234 159 aaKnown RBP14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 C8orf88P0DMB2 117 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 SUB1P53999 127 aaKnown RBP eCLIP14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 ACTL10Q5JWF8 245 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 LDLRAD2Q5SZI1 272 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 PQLC2Q6ZP29 291 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 PNKDQ8N490 385 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 TNFRSF14Q92956 283 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 MISP3Q96FF7 219 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 FAM167A-AS1Q96KT0 104 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 UBTD1Q9HAC8 227 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 SVEP1Q4LDE5 3571 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 CSMD1Q96PZ7 3565 aa14.98□□□□□ -0.01
PDLIM4-201ENST00000253754 SLC17A3O00476 420 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 CRYGBP07316 175 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 OR5I1Q13606 314 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 PATE2Q6UY27 113 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 LHFPL4Q7Z7J7 247 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 OR8B3Q8NGG8 313 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 OR8B2Q96RD0 313 aa14.97□□□□□ -0.01
PDLIM4-201ENST00000253754 NBPF19A0A087WUL8 3843 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms