RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RPEL1Q2QD12 228 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 TMEM30BQ3MIR4 351 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 TMEM200BQ69YZ2 307 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 NUP37Q8NFH4 326 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 OSR1Q8TAX0 266 aaPredicted RBP9.59□□□□□ -0.87
CD44-209ENST00000433892 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 NAV3Q8IVL0 2385 aa9.59□□□□□ -0.87
CD44-209ENST00000433892 TRAV5A0A0B4J249 113 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 C17orf100A8MU93 164 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 OR5G3P0C626 314 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 CRISP2P16562 243 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 TNFRSF1AP19438 455 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 RAB4BP61018 213 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 SELENOTP62341 195 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 RPL8P62917 257 aaKnown RBP9.58□□□□□ -0.88
CD44-209ENST00000433892 DIAPH2-AS1Q14236 149 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 FXYD3Q14802 87 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 ADIPOQQ15848 244 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 ZNF714Q96N38 554 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 SLC25A33Q9BSK2 321 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 ACACAQ13085 2346 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 SPTBN2O15020 2390 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 TRAV9-1A0A075B6T8 112 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 DPRXA6NFQ7 191 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 SNURFLB1AK76 121 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 IGHV3-48P01763 117 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 RNF224P0DH78 156 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 LINC00310P59036 64 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 TAS2R45P59539 299 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 SLC35B1P78383 322 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 SSBP2P81877 361 aaPredicted RBP9.58□□□□□ -0.88
CD44-209ENST00000433892 USF2Q15853 346 aaPredicted RBP9.58□□□□□ -0.88
CD44-209ENST00000433892 C10orf55Q5SWW7 151 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 H1FXQ92522 213 aaKnown RBP9.58□□□□□ -0.88
CD44-209ENST00000433892 FLYWCH2Q96CP2 140 aaKnown RBP9.58□□□□□ -0.88
CD44-209ENST00000433892 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
CD44-209ENST00000433892 A0A0G2JNJ9 132 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 F2Z2F3 143 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 C16orf97H3BN30 126 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 KLK10O43240 276 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 SERF1AO75920 110 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 ATP5IP56385 69 aaPredicted RBP9.57□□□□□ -0.88
CD44-209ENST00000433892 ERHP84090 104 aaKnown RBP9.57□□□□□ -0.88
CD44-209ENST00000433892 BSPH1Q075Z2 132 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 TIGITQ495A1 244 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 ST6GALNAC3Q8NDV1 305 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 OR10X1Q8NGY0 326 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 CCL17Q92583 94 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 Q9UFV3 132 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 SH3BGRL2Q9UJC5 107 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 ZNF318Q5VUA4 2279 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 TCL1AP56279 114 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 MEF2CQ06413 473 aaPredicted RBP9.57□□□□□ -0.88
CD44-209ENST00000433892 ZGRF1Q86YA3 2104 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 PNKDQ8N490 385 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 C19orf24Q9BVV8 132 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 SAP30LQ9HAJ7 183 aa9.57□□□□□ -0.88
CD44-209ENST00000433892 POLR3KQ9Y2Y1 108 aaPredicted RBP9.57□□□□□ -0.88
CD44-209ENST00000433892 DLL1O00548 723 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
CD44-209ENST00000433892 WT1-ASQ06250 92 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 TMEM177Q53S58 311 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 ASPHD1Q5U4P2 390 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 LYPD2Q6UXB3 125 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 Q6ZWC4 215 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 BAGE3Q86Y29 109 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 BAGE2Q86Y30 109 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 NHLRC2Q8NBF2 726 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 BEND2Q8NDZ0 799 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 CACNG8Q8WXS5 425 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 LINC00479Q96M42 142 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 SLC25A2Q9BXI2 301 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 LRBAP50851 2863 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 PPIAL4EA0A075B759 164 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 ZNF705FA8MVS1 300 aaPredicted RBP9.56□□□□□ -0.88
CD44-209ENST00000433892 PPIAL4DF5H284 164 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 IGLV2-8P01709 118 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 ZNF705DP0CH99 300 aaPredicted RBP9.56□□□□□ -0.88
CD44-209ENST00000433892 ZNF705BP0CI00 300 aaPredicted RBP9.56□□□□□ -0.88
CD44-209ENST00000433892 PPIAL4FP0DN26 164 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 UBE2L3P68036 154 aaKnown RBP9.56□□□□□ -0.88
CD44-209ENST00000433892 OR4C13Q8NGP0 309 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 FAM167A-AS1Q96KT0 104 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
CD44-209ENST00000433892 DNAJC4Q9NNZ3 241 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 TMEM106BQ9NUM4 274 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 PPIAL4AQ9Y536 164 aa9.56□□□□□ -0.88
CD44-209ENST00000433892 RELNP78509 3460 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 PLXNB1O43157 2135 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 A0A1W2PRE2 83 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 PSMB11A5LHX3 300 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 CGB1A6NKQ9 187 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 TMEM178BH3BS89 294 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms