RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 U3KQA8 63 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 MDC1Q14676 2089 aaKnown RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 RP1L1Q8IWN7 2480 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 CELSR2Q9HCU4 2923 aa2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPENQ96T58 3664 aaKnown RBP2.87□□□□□ -1.95
HMGB1P3-201ENST00000502802 TEX15Q9BXT5 2789 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 SNRNP200O75643 2136 aaKnown RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPTY2D1-AS1A0A0U1RR47 76 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TEX50A0A1B0GTY4 177 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 C4orf51C9J302 202 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 CXCR6O00574 342 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 DENRO43583 198 aaKnown RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 UCHL3P15374 230 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 CXCL2P19875 107 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 S100A1P23297 94 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 ACTBP60709 375 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 CXCR4P61073 352 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 POLR2GP62487 172 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 ACTG1P63261 375 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 HPCAP84074 193 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 DEFA6Q01524 100 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 GNA12Q03113 381 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 DHRS2Q13268 280 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 CCDC153Q494R4 210 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 LCN8Q6JVE9 175 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TNFAIP8L2Q6P589 184 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 LRRN1Q6UXK5 716 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 AKAP14Q86UN6 197 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 C10orf67Q8IYJ2 551 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TMEM35BQ8NCS4 154 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 JOSD2Q8TAC2 188 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 HAVCR2Q8TDQ0 301 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TMBIM1Q969X1 311 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 HIST1H2BAQ96A08 127 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 KLF6Q99612 283 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 RTBDNQ9BSG5 229 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 GNB1LQ9BYB4 327 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TCEAL2Q9H3H9 227 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 MAP1LC3AQ9H492 121 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TAS2R7Q9NYW3 318 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 R4GN34 69 aa2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 TNRC6AQ8NDV7 1962 aaKnown RBP2.86□□□□□ -1.95
HMGB1P3-201ENST00000502802 ITPR2Q14571 2701 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 IGKV1D-37A0A075B6S9 117 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 CXorf51AA0A1B0GTR3 108 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 C21orf140B9A014 251 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 LECT2O14960 151 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 RTL8CO15255 209 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 IL6P05231 212 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 NQO1P15559 274 aaKnown RBP2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 TSPAN31Q12999 210 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 PPP1R1AQ13522 171 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 MOGQ16653 247 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 DEFB133Q30KQ1 61 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPIN4Q56A73 249 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 AMMECR1LQ6DCA0 310 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 ZNF721Q8TF20 911 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 C6orf62Q9GZU0 229 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 MED28Q9H204 178 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 ABCG5Q9H222 651 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR51V1Q9H2C8 321 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 PARVBQ9HBI1 364 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 C8orf4Q9NR00 106 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 ASF1BQ9NVP2 202 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 PAQR5Q9NXK6 330 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 WASHC3Q9Y3C0 194 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 HDGFL3Q9Y3E1 203 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 TIMM22Q9Y584 194 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 CACNA1DQ01668 2161 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 LRRK2Q5S007 2527 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 LRBAP50851 2863 aa2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 USP9XQ93008 2570 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 SPTBN1Q01082 2364 aaKnown RBP2.85□□□□□ -1.95
HMGB1P3-201ENST00000502802 DOCK10Q96BY6 2186 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 USP9YO00507 2555 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 ICE1Q9Y2F5 2266 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 CNTRLQ7Z7A1 2325 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 SIGLEC16A6NMB1 481 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 GGTLC3B5MD39 225 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 D6RAR5 112 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 SMIM24O75264 130 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 STK16O75716 305 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 RPP14O95059 124 aaKnown RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 HMGN1P05114 100 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 ZNF708P17019 499 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 SDC4P31431 198 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 HSPA9P38646 679 aaKnown RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR1E2P47887 323 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 AP2S1P53680 142 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 BSPH1Q075Z2 132 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 TMEM267Q0VDI3 215 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 EBPQ15125 230 aaKnown RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 SLC9A3R2Q15599 337 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 PYCR3Q53H96 274 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 WDR59Q6PJI9 974 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 ATP5L2Q7Z4Y8 100 aa2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 EIF4E3Q8N5X7 224 aaKnown RBP2.84□□□□□ -1.95
HMGB1P3-201ENST00000502802 OR8J2Q8NGG1 315 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms