RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PTPRGP23470 1445 aa2.21□□□□□ -2.06
HFM1-208ENST00000488023 FGD6Q6ZV73 1430 aa2.21□□□□□ -2.06
HFM1-208ENST00000488023 SCN10AQ9Y5Y9 1956 aa2.21□□□□□ -2.06
HFM1-208ENST00000488023 MED14O60244 1454 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 LRRC9Q6ZRR7 1453 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 IGKV1D-37A0A075B6S9 117 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 TRAV4A0A0B4J268 109 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 C19orf71A6NCJ1 209 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 C16orf90A8MZG2 172 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 UBE2L6O14933 153 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 NDUFC2O95298 119 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 IL4P05112 153 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 SRP19P09132 144 aaKnown RBP2.2□□□□□ -2.06
HFM1-208ENST00000488023 CISD3P0C7P0 127 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 CCL3P10147 92 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 PPIBP23284 216 aaKnown RBP2.2□□□□□ -2.06
HFM1-208ENST00000488023 NPPCP23582 126 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 S100A7P31151 101 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 KDM5CP41229 1560 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 PSMD8P48556 350 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 AKR1C2P52895 323 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 NUP160Q12769 1436 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 PCM1Q15154 2024 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 RASL11AQ6T310 242 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 MROH2BQ7Z745 1585 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 DEFB132Q7Z7B7 95 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 ZNF709Q8N972 641 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 ST20-AS1Q8NBB2 130 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 SLC7A6Q92536 515 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 AIF1LQ9BQI0 150 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 UPK3BQ9BT76 320 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 VCXQ9H320 206 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 C16orf95Q9H693 158 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 EFCAB1Q9HAE3 211 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 HSPB11Q9Y547 144 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 TRAPPC1Q9Y5R8 145 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 DOCK9Q9BZ29 2069 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 TICRRQ7Z2Z1 1910 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 ABCC12Q96J65 1359 aa2.2□□□□□ -2.06
HFM1-208ENST00000488023 RTEL1-TNFRSF6BF6WH68 1400 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SETD5Q9C0A6 1442 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 TRAV9-1A0A075B6T8 112 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 A0A087WUU8 490 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 A8MU10 97 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 H3BQ85 93 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SLC17A3O00476 420 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 BANF1O75531 89 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 IGKV1-5P01602 117 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 KRTAP1-4P0C5Y4 121 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 IGHV3-30-3P0DP02 117 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 CRABP1P29762 137 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SRIP30626 198 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 CA5AP35218 305 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 FKBP1AP62942 108 aaKnown RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 FLI1Q01543 452 aaPredicted RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 DHRS2Q13268 280 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 EIF4EBP2Q13542 120 aaPredicted RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 LTC4SQ16873 150 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 Q6Q795 121 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 DHFR2Q86XF0 187 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 STARD4Q96DR4 205 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 DNAJC30Q96LL9 226 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SERPINI1Q99574 410 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SPIN2AQ99865 258 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SPIN2BQ9BPZ2 258 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 EFCAB11Q9BUY7 163 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 C6orf62Q9GZU0 229 aaPredicted RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 LRTM1Q9HBL6 345 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 GSKIPQ9P0R6 139 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 ERGIC3Q9Y282 383 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 KLK5Q9Y337 293 aaPredicted RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 AMMECR1Q9Y4X0 333 aaPredicted RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 TRIP11Q15643 1979 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 ATAD5Q96QE3 1844 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 SCN1AP35498 2009 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 MYH3P11055 1940 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 YTHDC2Q9H6S0 1430 aaKnown RBP2.19□□□□□ -2.06
HFM1-208ENST00000488023 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
HFM1-208ENST00000488023 TRAV41A0A0B4J266 112 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 MDFIC2A0A1B0GVS7 189 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 C7orf66A4D0T2 115 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 A8MWP6 167 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 MED6O75586 246 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 IGLV7-43P04211 117 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 SCGB1A1P11684 91 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 MUC1P15941 1255 aaPredicted RBP2.18□□□□□ -2.06
HFM1-208ENST00000488023 SLC25A16P16260 332 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 GABRA2P47869 451 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 RWDD2BP57060 319 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 KLF3P57682 345 aaPredicted RBP2.18□□□□□ -2.06
HFM1-208ENST00000488023 PSPHP78330 225 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 FAM229BQ4G0N7 80 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 TMEM69Q5SWH9 247 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 OR5J2Q8NH18 312 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 C11orf40Q8WZ69 217 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 H1FXQ92522 213 aaKnown RBP2.18□□□□□ -2.06
HFM1-208ENST00000488023 BORCS5Q969J3 196 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 TOMM6Q96B49 74 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 MGLLQ99685 303 aa2.18□□□□□ -2.06
HFM1-208ENST00000488023 C20orf27Q9GZN8 174 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms