RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 XAGE1AQ9HD64 81 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 MRPL27Q9P0M9 148 aaKnown RBP2.57□□□□□ -2
HMGB1P47-201ENST00000511281 NCOA1Q15788 1441 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 ADGRL3Q9HAR2 1447 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 CFAP43Q8NDM7 1665 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 MYO9BQ13459 2157 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 MUC21A0A0G2JKD1 596 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 MUC21A0A140T8X8 626 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 A0A1W2PQD3 144 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 GNRH2O43555 120 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 TTRP02766 147 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 OR4D2P58180 307 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 FXYD7P58549 80 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 FOXF1Q12946 379 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 OR13C8Q8NGS7 320 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 OR2T4Q8NH00 348 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 NMNAT3Q96T66 252 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 MIEN1Q9BRT3 115 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 RSL24D1Q9UHA3 163 aaKnown RBP2.56□□□□□ -2
HMGB1P47-201ENST00000511281 MMACHCQ9Y4U1 282 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 LRRC9Q6ZRR7 1453 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 FYCO1Q9BQS8 1478 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 EFCAB5A4FU69 1503 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 FRMPD1Q5SYB0 1578 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 LTBP2Q14767 1821 aa2.56□□□□□ -2
HMGB1P47-201ENST00000511281 A0A087WUJ7 227 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 PSMD12O00232 456 aaPredicted RBP2.55□□□□□ -2
HMGB1P47-201ENST00000511281 SLIT2O94813 1529 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 UCHL1P09936 223 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 PTPRMP28827 1452 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 MTUS2Q5JR59 1369 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 SAMD9Q5K651 1589 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 PP632Q6XCG6 107 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 ABCA9Q8IUA7 1624 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 PACRGLQ8N7B6 248 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 OR5B17Q8NGF7 314 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 ZNF675Q8TD23 568 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 RAPGEF6Q8TEU7 1601 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 FAM96AQ9H5X1 160 aa2.55□□□□□ -2
HMGB1P47-201ENST00000511281 NYNRINQ9P2P1 1898 aaKnown RBP2.55□□□□□ -2
HMGB1P47-201ENST00000511281 MYO16Q9Y6X6 1858 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 MADDQ8WXG6 1647 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 CDK13Q14004 1512 aaKnown RBP2.54□□□□□ -2
HMGB1P47-201ENST00000511281 MDFIC2A0A1B0GVS7 189 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 SDHAF1A6NFY7 115 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 SRP19P09132 144 aaKnown RBP2.54□□□□□ -2
HMGB1P47-201ENST00000511281 KCNE1P15382 129 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 HSD11B1P28845 292 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 MIAQ16674 131 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 TMEM97Q5BJF2 176 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 GLT8D1Q68CQ7 371 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 DCUN1D1Q96GG9 259 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 Q9BRP9 147 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 DCSTAMPQ9H295 470 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 IL20Q9NYY1 176 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 BCORL1Q5H9F3 1711 aa2.54□□□□□ -2
HMGB1P47-201ENST00000511281 PCF11O94913 1555 aaKnown RBP2.53□□□□□ -2
HMGB1P47-201ENST00000511281 TTC37Q6PGP7 1564 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P47-201ENST00000511281 FANCAO15360 1455 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 NEO1Q92859 1461 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 FGD6Q6ZV73 1430 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 SETD5Q9C0A6 1442 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 VPS37CA5D8V6 355 aaPredicted RBP2.53□□□□□ -2
HMGB1P47-201ENST00000511281 C11orf86A6NJI1 115 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 ZNF189O75820 626 aaPredicted RBP2.53□□□□□ -2
HMGB1P47-201ENST00000511281 ALDH3A1P30838 453 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 CAPZBP47756 277 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 HIST1H3AP68431 136 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 H3F3AP84243 136 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 MEF2BQ02080 365 aaPredicted RBP2.53□□□□□ -2
HMGB1P47-201ENST00000511281 AKR1C1Q04828 323 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 GUK1Q16774 197 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 LPCAT3Q6P1A2 487 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 SSX8Q7RTT4 187 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 PPP1R2P1Q96PQ5 205 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 FBXO5Q9UKT4 447 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 RICTORQ6R327 1708 aa2.53□□□□□ -2
HMGB1P47-201ENST00000511281 TIAM1Q13009 1591 aa2.53□□□□□ -2.01
HMGB1P47-201ENST00000511281 DENND4BO75064 1496 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 NCOA2Q15596 1464 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 CCDC18Q5T9S5 1454 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 MYOM3Q5VTT5 1437 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 SIPA1L1O43166 1804 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 TRGV5A0A0B4J1U4 118 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 KNCNA6PVL3 124 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 CCL5P13501 91 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 SNRPD2P62316 118 aaKnown RBP2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 MRPS25P82663 173 aaKnown RBP2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 SS18Q15532 418 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 IAH1Q2TAA2 248 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 ZNF283Q8N7M2 679 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 TTTY13Q9BZ97 58 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 GLTPQ9NZD2 209 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 RIMS1Q86UR5 1692 aaKnown RBP2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 HECW1Q76N89 1606 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 ITGB4P16144 1822 aa2.52□□□□□ -2.01
HMGB1P47-201ENST00000511281 HFM1A2PYH4 1435 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 MIA2Q96PC5 1412 aa2.51□□□□□ -2.01
HMGB1P47-201ENST00000511281 SCAPERQ9BY12 1400 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms