RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 UBALD1Q8TB05 177 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 FAM216AQ8WUB2 273 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 APH1AQ96BI3 265 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 SAMD10Q9BYL1 202 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 KMT2EQ8IZD2 1858 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 MED12LQ86YW9 2145 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 USF3Q68DE3 2245 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 PRSS46E5RG02 174 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 NXPH2O95156 264 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 CD33P20138 364 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 CLDN18P56856 261 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 OR5I1Q13606 314 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 FBXW9Q5XUX1 488 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 TREML4Q6UXN2 200 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 SLC35E1Q96K37 410 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 LRFN3Q9BTN0 628 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 GGTLC1Q9BX51 225 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 OPN3Q9H1Y3 402 aaPredicted RBP14.8□□□□□ -0.04
NUP54-205ENST00000507257 HES4Q9HCC6 221 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 FCN1O00602 326 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 GDF9O60383 454 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 MT-CO2P00403 227 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 OR1C1Q15619 314 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 GABRA6Q16445 453 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 RPEL1Q2QD12 228 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 KRTCAP3Q53RY4 240 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 ZNF766Q5HY98 468 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 NINJ1Q92982 152 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 UQCR10Q9UDW1 63 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 FBXL7Q9UJT9 491 aa14.79□□□□□ -0.04
NUP54-205ENST00000507257 PINLYPA6NC86 204 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 K7EN84 100 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 ZNHIT1O43257 154 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 HAND1O96004 215 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 HBZP02008 142 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 CYB561P49447 251 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 RAB7AP51149 207 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 Q0VFX4 171 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 PPP1R32Q7Z5V6 425 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 LRP11Q86VZ4 500 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 ZNF808Q8N4W9 903 aaPredicted RBP14.78□□□□□ -0.04
NUP54-205ENST00000507257 OR2M7Q8NG81 312 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 EAF1Q96JC9 268 aaPredicted RBP14.78□□□□□ -0.04
NUP54-205ENST00000507257 MGST2Q99735 147 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 V9GYV3 84 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 C3orf80F5H4A9 247 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 RBMXL2O75526 392 aaKnown RBP14.78□□□□□ -0.04
NUP54-205ENST00000507257 GCHFRP30047 84 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 RPL31P62899 125 aaKnown RBP14.78□□□□□ -0.04
NUP54-205ENST00000507257 PSG7Q13046 419 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 MMD2Q8IY49 270 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 UHRF2Q96PU4 802 aa14.78□□□□□ -0.04
NUP54-205ENST00000507257 LSM4Q9Y4Z0 139 aaKnown RBP14.78□□□□□ -0.04
NUP54-205ENST00000507257 YTHDF2Q9Y5A9 579 aaKnown RBP14.78□□□□□ -0.04
NUP54-205ENST00000507257 RANBP2P49792 3224 aaKnown RBP14.77□□□□□ -0.04
NUP54-205ENST00000507257 SNURFLB1AK76 121 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 DIRC3C9JPN6 131 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 MT-CO3P00414 261 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 TDGF1P13385 188 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 RPS16P62249 146 aaKnown RBP14.77□□□□□ -0.04
NUP54-205ENST00000507257 PLGLB1Q02325 96 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 HLA-DRB5Q30154 266 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 DMRTA1Q5VZB9 504 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 OR52L2PQ8NGH6 319 aa14.77□□□□□ -0.04
NUP54-205ENST00000507257 NANOS1Q8WY41 292 aaKnown RBP14.77□□□□□ -0.04
NUP54-205ENST00000507257 LAMA1P25391 3075 aa14.77□□□□□ -0.05
NUP54-205ENST00000507257 RRHO14718 337 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 SIAH2O43255 324 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 ZNF253O75346 499 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 CHRNB4P30926 498 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 VDAC2P45880 294 aaPredicted RBP14.76□□□□□ -0.05
NUP54-205ENST00000507257 CX3CL1P78423 397 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 ANKRD39Q53RE8 183 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 PRR7Q8TB68 274 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 IFI44Q8TCB0 444 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 ORAOV1Q8WV07 137 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 KCNS1Q96KK3 526 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 PHF7Q9BWX1 381 aaPredicted RBP14.76□□□□□ -0.05
NUP54-205ENST00000507257 GNB4Q9HAV0 340 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 PTPRBP23467 1997 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 LINC00473A8K010 186 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 OR5G3P0C626 314 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 IER3P46695 156 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 THBS3P49746 956 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 RHOBP62745 196 aa14.76□□□□□ -0.05
NUP54-205ENST00000507257 SUMO1P63165 101 aaKnown RBP14.76□□□□□ -0.05
NUP54-205ENST00000507257 NTN3O00634 580 aaPredicted RBP14.75□□□□□ -0.05
NUP54-205ENST00000507257 PSPNO60542 156 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 IGLC2P0DOY2 106 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 IGLC3P0DOY3 106 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 BMP5P22003 454 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 SPATA45Q537H7 98 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 C11orf42Q8N5U0 333 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 FAM173AQ9BQD7 235 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 NPVFQ9HCQ7 196 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 DNAJC4Q9NNZ3 241 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 ASCL3Q9NQ33 180 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 OSTCQ9NRP0 149 aa14.75□□□□□ -0.05
NUP54-205ENST00000507257 DIDO1Q9BTC0 2240 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms