RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR47, Length 99 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR47	snR47	MIP6	P38760	659 aa	Known RBP	0.44	□□□□□ -2.34
snR47	snR47	SSF1	P38789	453 aa	Predicted RBP	0.44	□□□□□ -2.34
snR47	snR47	KRE9	P39005	276 aa		0.44	□□□□□ -2.34
snR47	snR47	YFL015C	P43578	164 aa		0.44	□□□□□ -2.34
snR47	snR47	NIT3	P49954	291 aa		0.44	□□□□□ -2.34
snR47	snR47	TRS23	Q03784	219 aa		0.44	□□□□□ -2.34
snR47	snR47	ECM16	Q04217	1267 aa	Known RBP	0.44	□□□□□ -2.34
snR47	snR47	YBR298C-A	Q8TGK4	73 aa		0.44	□□□□□ -2.34
snR47	snR47	ECM3	Q99252	613 aa		0.44	□□□□□ -2.34
snR47	snR47	WHI2	P12611	486 aa		0.43	□□□□□ -2.34
snR47	snR47	MNR2	P35724	969 aa		0.43	□□□□□ -2.34
snR47	snR47	YHR218W	P38899	603 aa		0.43	□□□□□ -2.34
snR47	snR47	SPG5	P42933	373 aa		0.43	□□□□□ -2.34
snR47	snR47	CRZ1	P53968	678 aa		0.43	□□□□□ -2.34
snR47	snR47	ORC4	P54791	529 aa		0.43	□□□□□ -2.34
snR47	snR47	YPL071C	Q02864	156 aa		0.43	□□□□□ -2.34
snR47	snR47	TIP41	Q12199	356 aa		0.43	□□□□□ -2.34
snR47	snR47	CET1	O13297	549 aa	Predicted RBP	0.42	□□□□□ -2.34
snR47	snR47	GAL4	P04386	881 aa		0.42	□□□□□ -2.34
snR47	snR47	SCT1	P32784	759 aa		0.42	□□□□□ -2.34
snR47	snR47	PET10	P36139	283 aa		0.42	□□□□□ -2.34
snR47	snR47	PBY1	P38254	753 aa		0.42	□□□□□ -2.34
snR47	snR47	MGE1	P38523	228 aa		0.42	□□□□□ -2.34
snR47	snR47	RLP7	P40693	322 aa	Known RBP	0.42	□□□□□ -2.34
snR47	snR47	FAA4	P47912	694 aa	Known RBP	0.42	□□□□□ -2.34
snR47	snR47	SPO1	P53541	631 aa		0.42	□□□□□ -2.34
snR47	snR47	DIG1	Q03063	452 aa	Known RBP	0.42	□□□□□ -2.34
snR47	snR47	YFT2	Q06676	274 aa		0.42	□□□□□ -2.34
snR47	snR47	REH1	Q06709	432 aa		0.42	□□□□□ -2.34
snR47	snR47	YDL073W	Q07454	984 aa		0.42	□□□□□ -2.34
snR47	snR47	YPR071W	Q12346	211 aa		0.42	□□□□□ -2.34
snR47	snR47	SOD1	P00445	154 aa	Known RBP	0.41	□□□□□ -2.34
snR47	snR47	SEC1	P30619	724 aa	Known RBP	0.41	□□□□□ -2.34
snR47	snR47	PTH1	P38876	190 aa	Known RBP	0.41	□□□□□ -2.34
snR47	snR47	YIL077C	P40508	320 aa		0.41	□□□□□ -2.34
snR47	snR47	YGR283C	P53336	341 aa	Predicted RBP	0.41	□□□□□ -2.34
snR47	snR47	YDR338C	Q05497	695 aa		0.41	□□□□□ -2.34
snR47	snR47	HRD3	Q05787	833 aa		0.41	□□□□□ -2.34
snR47	snR47	YDL012C	Q12489	107 aa		0.41	□□□□□ -2.34
snR47	snR47	YER175W-A	Q8TGU4	54 aa		0.41	□□□□□ -2.34
snR47	snR47	DIF1	O13577	133 aa		0.4	□□□□□ -2.35
snR47	snR47	YML002W	P0CF17	737 aa		0.4	□□□□□ -2.35
snR47	snR47	CNE1	P27825	502 aa		0.4	□□□□□ -2.35
snR47	snR47	YJU2	P28320	278 aa	Predicted RBP	0.4	□□□□□ -2.35
snR47	snR47	MRP8	P35719	219 aa		0.4	□□□□□ -2.35
snR47	snR47	COS111	P38308	924 aa		0.4	□□□□□ -2.35
snR47	snR47	YNL195C	P40168	261 aa		0.4	□□□□□ -2.35
snR47	snR47	SHR5	P41912	237 aa		0.4	□□□□□ -2.35
snR47	snR47	GSM1	P42950	618 aa		0.4	□□□□□ -2.35
snR47	snR47	GYP8	P43570	497 aa		0.4	□□□□□ -2.35
snR47	snR47	ZDS1	P50111	915 aa	Known RBP	0.4	□□□□□ -2.35
snR47	snR47	YIP4	P53093	235 aa		0.4	□□□□□ -2.35
snR47	snR47	CUL3	P53202	744 aa		0.4	□□□□□ -2.35
snR47	snR47	FMP42	Q04991	504 aa		0.4	□□□□□ -2.35
snR47	snR47	GPN2	Q08726	347 aa	Predicted RBP	0.4	□□□□□ -2.35
snR47	snR47	NAT1	P12945	854 aa	Known RBP	0.39	□□□□□ -2.35
snR47	snR47	MSD1	P15179	658 aa	Known RBP	0.39	□□□□□ -2.35
snR47	snR47	MAK32	P23060	363 aa		0.39	□□□□□ -2.35
snR47	snR47	YPT7	P32939	208 aa		0.39	□□□□□ -2.35
snR47	snR47	SRO77	P38163	1010 aa		0.39	□□□□□ -2.35
snR47	snR47	BZZ1	P38822	633 aa		0.39	□□□□□ -2.35
snR47	snR47	IPL1	P38991	367 aa		0.39	□□□□□ -2.35
snR47	snR47	YJL070C	P40361	888 aa		0.39	□□□□□ -2.35
snR47	snR47	YIL092W	P40497	633 aa		0.39	□□□□□ -2.35
snR47	snR47	YPI1	P43587	155 aa		0.39	□□□□□ -2.35
snR47	snR47	RBG2	P53295	368 aa	Known RBP	0.39	□□□□□ -2.35
snR47	snR47	BOR1	P53838	576 aa		0.39	□□□□□ -2.35
snR47	snR47	OYE2	Q03558	400 aa	Known RBP	0.39	□□□□□ -2.35
snR47	snR47	GFD1	Q04839	188 aa	Known RBP	0.39	□□□□□ -2.35
snR47	snR47	FAL1	Q12099	399 aa	Known RBP	0.39	□□□□□ -2.35
snR47	snR47	FAB1	P34756	2278 aa		0.38	□□□□□ -2.35
snR47	snR47	CDC11	P32458	415 aa		0.38	□□□□□ -2.35
snR47	snR47	PRE5	P40302	234 aa	Known RBP	0.38	□□□□□ -2.35
snR47	snR47	TY4A-J	P47023	414 aa		0.38	□□□□□ -2.35
snR47	snR47	BNA2	P47125	453 aa		0.38	□□□□□ -2.35
snR47	snR47	COX18	P53239	316 aa		0.38	□□□□□ -2.35
snR47	snR47	RPS15	Q01855	142 aa	Known RBP	0.38	□□□□□ -2.35
snR47	snR47	SPO75	Q07798	868 aa		0.38	□□□□□ -2.35
snR47	snR47	GET3	Q12154	354 aa	Known RBP	0.38	□□□□□ -2.35
snR47	snR47	POM34	Q12445	299 aa		0.38	□□□□□ -2.35
snR47	snR47	CYB2	P00175	591 aa		0.37	□□□□□ -2.35
snR47	snR47	PMS1	P14242	873 aa		0.37	□□□□□ -2.35
snR47	snR47	ATE1	P16639	503 aa		0.37	□□□□□ -2.35
snR47	snR47	PRP9	P19736	530 aa	Known RBP	0.37	□□□□□ -2.35
snR47	snR47	RNR3	P21672	869 aa	Known RBP	0.37	□□□□□ -2.35
snR47	snR47	GSH1	P32477	678 aa		0.37	□□□□□ -2.35
snR47	snR47	SCO2	P38072	301 aa		0.37	□□□□□ -2.35
snR47	snR47	YBR284W	P38150	797 aa		0.37	□□□□□ -2.35
snR47	snR47	PCL6	P40038	420 aa		0.37	□□□□□ -2.35
snR47	snR47	ATP25	Q03153	612 aa		0.37	□□□□□ -2.35
snR47	snR47	GSH2	Q08220	491 aa		0.37	□□□□□ -2.35
snR47	snR47	YOR131C	Q12486	218 aa		0.37	□□□□□ -2.35
snR47	snR47	BI2	P03873	423 aa		0.36	□□□□□ -2.35
snR47	snR47	YKL069W	P36088	180 aa		0.36	□□□□□ -2.35
snR47	snR47	PFD1	P46988	109 aa		0.36	□□□□□ -2.35
snR47	snR47	SAP4	P53036	818 aa		0.36	□□□□□ -2.35
snR47	snR47	BUD17	P53727	317 aa		0.36	□□□□□ -2.35
snR47	snR47	CWC24	P53769	259 aa		0.36	□□□□□ -2.35
snR47	snR47	GDE1	Q02979	1223 aa		0.36	□□□□□ -2.35
snR47	snR47	YDR514C	Q04408	483 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 89.8 ms