RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	ECM3	Q99252	613 aa		4.64	□□□□□ -1.67
FDH2	YPL275W	MVD1	P32377	396 aa	Known RBP	4.63	□□□□□ -1.67
FDH2	YPL275W	YKU70	P32807	602 aa		4.63	□□□□□ -1.67
FDH2	YPL275W	OAF1	P39720	1047 aa	Predicted RBP	4.63	□□□□□ -1.67
FDH2	YPL275W	SDS3	P40505	327 aa		4.63	□□□□□ -1.67
FDH2	YPL275W	RSC8	P43609	557 aa	Known RBP	4.63	□□□□□ -1.67
FDH2	YPL275W	RPS0B	P46654	252 aa	Known RBP	4.63	□□□□□ -1.67
FDH2	YPL275W	VPS36	Q06696	566 aa		4.63	□□□□□ -1.67
FDH2	YPL275W	HBT1	Q07653	1046 aa	Known RBP	4.63	□□□□□ -1.67
FDH2	YPL275W	HFI1	Q12060	488 aa		4.63	□□□□□ -1.67
FDH2	YPL275W	RPS21B	Q3E754	87 aa	Known RBP	4.63	□□□□□ -1.67
FDH2	YPL275W	YKL033W-A	Q86ZR7	236 aa		4.63	□□□□□ -1.67
FDH2	YPL275W	IME1	P21190	360 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	PET127	P32606	800 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	OAF3	P36023	863 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	PCL5	P38794	229 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	SFB3	P38810	929 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	REV7	P38927	245 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	YGR237C	P50089	785 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	SMX3	P54999	86 aa	Predicted RBP	4.62	□□□□□ -1.67
FDH2	YPL275W	TIM44	Q01852	431 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	RCR2	Q03446	210 aa	Known RBP	4.62	□□□□□ -1.67
FDH2	YPL275W	YLR407W	Q06070	228 aa		4.62	□□□□□ -1.67
FDH2	YPL275W	ISA1	Q07821	250 aa	Predicted RBP	4.62	□□□□□ -1.67
FDH2	YPL275W	YTM1	Q12024	460 aa	Predicted RBP	4.62	□□□□□ -1.67
FDH2	YPL275W	MTH1	P35198	433 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	PHO11	P35842	467 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	BIT2	P38346	545 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	PHO12	P38693	467 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	MNN11	P46985	422 aa	Known RBP	4.61	□□□□□ -1.67
FDH2	YPL275W	BIT61	P47041	543 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	COX18	P53239	316 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	GND2	P53319	492 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	HFD1	Q04458	532 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	YPS7	Q06325	596 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	MLH3	Q12083	715 aa		4.61	□□□□□ -1.67
FDH2	YPL275W	FRS1	P15624	595 aa	Known RBP	4.6	□□□□□ -1.67
FDH2	YPL275W	THR1	P17423	357 aa	Known RBP	4.6	□□□□□ -1.67
FDH2	YPL275W	PRP45	P28004	379 aa	Predicted RBP	4.6	□□□□□ -1.67
FDH2	YPL275W	GRX4	P32642	244 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	BCS1	P32839	456 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	YKR075C	P36155	307 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	QRI1	P43123	477 aa	Known RBP	4.6	□□□□□ -1.67
FDH2	YPL275W	RPN11	P43588	306 aa	Known RBP	4.6	□□□□□ -1.67
FDH2	YPL275W	SSL2	Q00578	843 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	IRC10	Q08118	586 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	VHS3	Q08438	674 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	CLF1	Q12309	687 aa	Predicted RBP	4.6	□□□□□ -1.67
FDH2	YPL275W	RAD9	P14737	1309 aa		4.6	□□□□□ -1.67
FDH2	YPL275W	ERG20	P08524	352 aa	Known RBP	4.59	□□□□□ -1.67
FDH2	YPL275W	RPS21A	P0C0V8	87 aa	Known RBP	4.59	□□□□□ -1.67
FDH2	YPL275W	URB1	P34241	1764 aa	Known RBP	4.59	□□□□□ -1.67
FDH2	YPL275W	FAT1	P38225	669 aa		4.59	□□□□□ -1.67
FDH2	YPL275W	UBS1	P38290	277 aa		4.59	□□□□□ -1.67
FDH2	YPL275W	CCT7	P42943	550 aa	Known RBP	4.59	□□□□□ -1.67
FDH2	YPL275W	IES1	P43579	692 aa		4.59	□□□□□ -1.67
FDH2	YPL275W	UBA2	P52488	636 aa		4.59	□□□□□ -1.67
FDH2	YPL275W	NOP15	P53927	220 aa	Predicted RBP	4.59	□□□□□ -1.67
FDH2	YPL275W	STP4	Q07351	490 aa		4.59	□□□□□ -1.67
FDH2	YPL275W	FAP7	Q12055	197 aa	Predicted RBP	4.59	□□□□□ -1.67
FDH2	YPL275W	POM34	Q12445	299 aa		4.59	□□□□□ -1.67
FDH2	YPL275W	RPS17A	P02407	136 aa	Known RBP	4.58	□□□□□ -1.68
FDH2	YPL275W	RPS17B	P14127	136 aa	Known RBP	4.58	□□□□□ -1.68
FDH2	YPL275W	PRP28	P23394	588 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	SEC65	P29478	273 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	DID4	P36108	232 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	TAF5	P38129	798 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	YMR210W	Q03649	449 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	CHS5	Q12114	671 aa	Known RBP	4.58	□□□□□ -1.68
FDH2	YPL275W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
FDH2	YPL275W	TAF3	Q12297	353 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	ZRT2	Q12436	422 aa		4.58	□□□□□ -1.68
FDH2	YPL275W	EDE1	P34216	1381 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	FEN2	P25621	512 aa	Known RBP	4.57	□□□□□ -1.68
FDH2	YPL275W	MSS1	P32559	526 aa	Predicted RBP	4.57	□□□□□ -1.68
FDH2	YPL275W	SET3	P36124	751 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	YEN1	P40028	759 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	PIG2	P40187	538 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	NDC80	P40460	691 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	BUD8	P41698	603 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	YFR016C	P43597	1233 aa	Known RBP	4.57	□□□□□ -1.68
FDH2	YPL275W	ATG4	P53867	494 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	YHM2	Q04013	314 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	DIA2	Q08496	732 aa	Predicted RBP	4.57	□□□□□ -1.68
FDH2	YPL275W	MRH1	Q12117	320 aa	Predicted RBP	4.57	□□□□□ -1.68
FDH2	YPL275W	TY4B-H	P0C2J7	1802 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	TY4B-J	P47024	1803 aa		4.57	□□□□□ -1.68
FDH2	YPL275W	CDC26	P14724	124 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	KIN82	P25341	720 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	ARG2	P40360	574 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	DOT5	P40553	215 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	DUG1	P43616	481 aa	Known RBP	4.56	□□□□□ -1.68
FDH2	YPL275W	BFA1	P47113	574 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	RFX1	P48743	811 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	LYS4	P49367	693 aa	Predicted RBP	4.56	□□□□□ -1.68
FDH2	YPL275W	PTA1	Q01329	785 aa	Predicted RBP	4.56	□□□□□ -1.68
FDH2	YPL275W	VBA4	Q04602	768 aa	Known RBP	4.56	□□□□□ -1.68
FDH2	YPL275W	TAD3	Q9URQ3	322 aa		4.56	□□□□□ -1.68
FDH2	YPL275W	FKS3	Q04952	1785 aa		4.55	□□□□□ -1.68
FDH2	YPL275W	RAV1	P47104	1357 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms