RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W YPK1P12688 680 aaKnown RBP8.9□□□□□ -0.99
AMF1YOR378W PEP7P32609 515 aa8.9□□□□□ -0.99
AMF1YOR378W TIF5P38431 405 aaKnown RBP8.9□□□□□ -0.99
AMF1YOR378W ERP2P39704 215 aa8.9□□□□□ -0.99
AMF1YOR378W TMA108P40462 946 aa8.9□□□□□ -0.99
AMF1YOR378W GUF1P46943 645 aa8.9□□□□□ -0.99
AMF1YOR378W VPS25P47142 202 aa8.9□□□□□ -0.99
AMF1YOR378W YGR283CP53336 341 aaPredicted RBP8.9□□□□□ -0.99
AMF1YOR378W YNL040WP53960 456 aaPredicted RBP8.9□□□□□ -0.99
AMF1YOR378W THI7Q05998 598 aa8.9□□□□□ -0.99
AMF1YOR378W IDI1P15496 288 aa8.89□□□□□ -0.99
AMF1YOR378W RAD27P26793 382 aa8.89□□□□□ -0.99
AMF1YOR378W PEX2P32800 271 aa8.89□□□□□ -0.99
AMF1YOR378W NFU1P32860 256 aa8.89□□□□□ -0.99
AMF1YOR378W HSL7P38274 827 aa8.89□□□□□ -0.99
AMF1YOR378W AVT2P39981 480 aa8.89□□□□□ -0.99
AMF1YOR378W FMP10P40098 244 aa8.89□□□□□ -0.99
AMF1YOR378W YMR134WP40207 237 aa8.89□□□□□ -0.99
AMF1YOR378W ARG2P40360 574 aa8.89□□□□□ -0.99
AMF1YOR378W CDC1P40986 491 aa8.89□□□□□ -0.99
AMF1YOR378W VTC4P47075 721 aa8.89□□□□□ -0.99
AMF1YOR378W UTP6Q02354 440 aaKnown RBP8.89□□□□□ -0.99
AMF1YOR378W ELP3Q02908 557 aaKnown RBP8.89□□□□□ -0.99
AMF1YOR378W RKM2Q03942 479 aa8.89□□□□□ -0.99
AMF1YOR378W THI21Q08975 551 aa8.89□□□□□ -0.99
AMF1YOR378W MNL2Q12205 849 aa8.89□□□□□ -0.99
AMF1YOR378W AHC1Q12433 566 aa8.89□□□□□ -0.99
AMF1YOR378W VPS13Q07878 3144 aa8.89□□□□□ -0.99
AMF1YOR378W UBR2Q07963 1872 aa8.88□□□□□ -0.99
AMF1YOR378W POL3P15436 1097 aa8.88□□□□□ -0.99
AMF1YOR378W RGR1P19263 1082 aa8.88□□□□□ -0.99
AMF1YOR378W PGS1P25578 521 aa8.88□□□□□ -0.99
AMF1YOR378W YBR056WP38081 501 aa8.88□□□□□ -0.99
AMF1YOR378W YBR053CP38235 358 aa8.88□□□□□ -0.99
AMF1YOR378W FAF1P40546 346 aaPredicted RBP8.88□□□□□ -0.99
AMF1YOR378W BFA1P47113 574 aa8.88□□□□□ -0.99
AMF1YOR378W RPL22BP56628 122 aaKnown RBP8.88□□□□□ -0.99
AMF1YOR378W SPO71Q03868 1245 aa8.88□□□□□ -0.99
AMF1YOR378W YDR018CQ12185 396 aa8.88□□□□□ -0.99
AMF1YOR378W MEI4P29467 408 aa8.87□□□□□ -0.99
AMF1YOR378W GCD6P32501 712 aaKnown RBP8.87□□□□□ -0.99
AMF1YOR378W TSA1P34760 196 aaKnown RBP8.87□□□□□ -0.99
AMF1YOR378W MSG5P38590 489 aa8.87□□□□□ -0.99
AMF1YOR378W FHL1P39521 936 aa8.87□□□□□ -0.99
AMF1YOR378W PEX31P53203 462 aa8.87□□□□□ -0.99
AMF1YOR378W HRD3Q05787 833 aa8.87□□□□□ -0.99
AMF1YOR378W YDL073WQ07454 984 aa8.87□□□□□ -0.99
AMF1YOR378W YLR422WQ06409 1932 aa8.87□□□□□ -0.99
AMF1YOR378W RAD10P06838 210 aa8.86□□□□□ -0.99
AMF1YOR378W PRP9P19736 530 aaKnown RBP8.86□□□□□ -0.99
AMF1YOR378W SLY1P22213 666 aa8.86□□□□□ -0.99
AMF1YOR378W DSS4P32601 143 aa8.86□□□□□ -0.99
AMF1YOR378W LAS1P36146 502 aaPredicted RBP8.86□□□□□ -0.99
AMF1YOR378W ECM2P38241 364 aaKnown RBP8.86□□□□□ -0.99
AMF1YOR378W SIF2P38262 535 aa8.86□□□□□ -0.99
AMF1YOR378W SSP1P38871 571 aa8.86□□□□□ -0.99
AMF1YOR378W PRK1P40494 810 aa8.86□□□□□ -0.99
AMF1YOR378W YIR016WP40572 265 aa8.86□□□□□ -0.99
AMF1YOR378W NMD5P46970 1048 aa8.86□□□□□ -0.99
AMF1YOR378W HLJ1P48353 224 aa8.86□□□□□ -0.99
AMF1YOR378W CEG1Q01159 459 aaPredicted RBP8.86□□□□□ -0.99
AMF1YOR378W SND1Q04007 877 aa8.86□□□□□ -0.99
AMF1YOR378W SPP381P38282 291 aaPredicted RBP8.85□□□□□ -0.99
AMF1YOR378W NMD3P38861 518 aaKnown RBP8.85□□□□□ -0.99
AMF1YOR378W FLC2P39719 783 aa8.85□□□□□ -0.99
AMF1YOR378W YNL320WP42840 284 aa8.85□□□□□ -0.99
AMF1YOR378W YJL045WP47052 634 aa8.85□□□□□ -0.99
AMF1YOR378W MTD1Q02046 320 aaKnown RBP8.85□□□□□ -0.99
AMF1YOR378W AAD4Q07747 329 aa8.85□□□□□ -0.99
AMF1YOR378W FAP7Q12055 197 aaPredicted RBP8.85□□□□□ -0.99
AMF1YOR378W CCP1P00431 361 aa8.85□□□□□ -0.99
AMF1YOR378W PUF4P25339 888 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
AMF1YOR378W URK1P27515 501 aa8.85□□□□□ -0.99
AMF1YOR378W LTV1P34078 463 aa8.85□□□□□ -0.99
AMF1YOR378W CDC27P38042 758 aa8.85□□□□□ -0.99
AMF1YOR378W PBP2P38151 413 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
AMF1YOR378W VHC1P38329 1120 aa8.85□□□□□ -0.99
AMF1YOR378W STB5P38699 743 aa8.85□□□□□ -0.99
AMF1YOR378W SAW1P39735 261 aa8.85□□□□□ -0.99
AMF1YOR378W RGD2P43556 714 aa8.85□□□□□ -0.99
AMF1YOR378W MIC19P43594 170 aa8.85□□□□□ -0.99
AMF1YOR378W SPG3Q04398 127 aaPredicted RBP8.85□□□□□ -0.99
AMF1YOR378W AIM32Q04689 311 aa8.85□□□□□ -0.99
AMF1YOR378W ECM22Q05958 814 aaPredicted RBP8.85□□□□□ -0.99
AMF1YOR378W SAM3Q08986 587 aa8.85□□□□□ -0.99
AMF1YOR378W ARP7Q12406 477 aa8.85□□□□□ -0.99
AMF1YOR378W IZH4Q99393 312 aa8.85□□□□□ -0.99
AMF1YOR378W PAB1P04147 577 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
AMF1YOR378W SPO16P17122 198 aa8.84□□□□□ -0.99
AMF1YOR378W YKR051WP36142 418 aa8.84□□□□□ -0.99
AMF1YOR378W POP4P38336 279 aa8.84□□□□□ -0.99
AMF1YOR378W PRM9P39551 298 aa8.84□□□□□ -0.99
AMF1YOR378W MAF1P41910 395 aa8.84□□□□□ -0.99
AMF1YOR378W KTR6P54070 446 aa8.84□□□□□ -0.99
AMF1YOR378W BET4Q00618 327 aa8.84□□□□□ -0.99
AMF1YOR378W HER2Q03557 464 aa8.84□□□□□ -0.99
AMF1YOR378W YLR257WQ06146 321 aaKnown RBP8.84□□□□□ -0.99
AMF1YOR378W PMT7Q06644 662 aa8.84□□□□□ -0.99
AMF1YOR378W TPO1Q07824 586 aa8.84□□□□□ -0.99
AMF1YOR378W YCR015CP25616 317 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms