RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W RRP7P25368 297 aaPredicted RBP3.41□□□□□ -1.86
MSH2YOL090W TFB1P32776 642 aa3.41□□□□□ -1.86
MSH2YOL090W DJP1P40564 432 aa3.41□□□□□ -1.86
MSH2YOL090W PIL1P53252 339 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W MTD1Q02046 320 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W NGL1Q08213 363 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W ARG3P05150 338 aa3.41□□□□□ -1.86
MSH2YOL090W POT1P27796 417 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
MSH2YOL090W STL1P39932 569 aa3.41□□□□□ -1.86
MSH2YOL090W VID28P40547 921 aa3.41□□□□□ -1.86
MSH2YOL090W MAD2P40958 196 aa3.41□□□□□ -1.86
MSH2YOL090W POL31P46957 487 aa3.41□□□□□ -1.86
MSH2YOL090W ALY2P47029 1046 aa3.41□□□□□ -1.86
MSH2YOL090W HAS1Q03532 505 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W RTN2Q12443 393 aa3.41□□□□□ -1.86
MSH2YOL090W VMA2P16140 517 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W MNE1P24720 663 aa3.41□□□□□ -1.86
MSH2YOL090W DBF4P32325 704 aa3.41□□□□□ -1.86
MSH2YOL090W TGL1P34163 548 aa3.41□□□□□ -1.86
MSH2YOL090W RPN10P38886 268 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W SAW1P39735 261 aa3.41□□□□□ -1.86
MSH2YOL090W FMP10P40098 244 aa3.41□□□□□ -1.86
MSH2YOL090W SKP2P42843 763 aa3.41□□□□□ -1.86
MSH2YOL090W SIP4P46954 829 aa3.41□□□□□ -1.86
MSH2YOL090W MTC3P53077 123 aa3.41□□□□□ -1.86
MSH2YOL090W ALF1P53904 254 aa3.41□□□□□ -1.86
MSH2YOL090W YOR059CQ08448 450 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W SGT2Q12118 346 aaKnown RBP3.41□□□□□ -1.86
MSH2YOL090W NFI1Q12216 726 aa3.41□□□□□ -1.86
MSH2YOL090W BCK1Q01389 1478 aa3.4□□□□□ -1.86
MSH2YOL090W RPL19AP0CX82 189 aaKnown RBP3.4□□□□□ -1.86
MSH2YOL090W RPL19BP0CX83 189 aaPredicted RBP3.4□□□□□ -1.86
MSH2YOL090W APE1P14904 514 aa3.4□□□□□ -1.86
MSH2YOL090W THR1P17423 357 aaKnown RBP3.4□□□□□ -1.86
MSH2YOL090W DIT1P21623 536 aa3.4□□□□□ -1.86
MSH2YOL090W TRX1P22217 103 aaKnown RBP3.4□□□□□ -1.86
MSH2YOL090W SRO9P25567 434 aaKnown RBP3.4□□□□□ -1.86
MSH2YOL090W GPI10P30777 616 aa3.4□□□□□ -1.86
MSH2YOL090W NAS2P40555 220 aa3.4□□□□□ -1.86
MSH2YOL090W FET4P40988 552 aa3.4□□□□□ -1.86
MSH2YOL090W SGF73P53165 657 aa3.4□□□□□ -1.86
MSH2YOL090W CSR1Q06705 408 aaKnown RBP3.4□□□□□ -1.86
MSH2YOL090W SYT1Q06836 1226 aa3.4□□□□□ -1.86
MSH2YOL090W SOG2Q08817 791 aa3.4□□□□□ -1.86
MSH2YOL090W DIN7Q12086 430 aa3.4□□□□□ -1.86
MSH2YOL090W PAR32Q12515 295 aaKnown RBP3.4□□□□□ -1.86
MSH2YOL090W PCD1Q12524 340 aa3.4□□□□□ -1.86
MSH2YOL090W YOL159C-AQ3E769 90 aa3.4□□□□□ -1.86
MSH2YOL090W TUF1P02992 437 aaKnown RBP3.4□□□□□ -1.87
MSH2YOL090W SES1P07284 462 aaKnown RBP3.4□□□□□ -1.87
MSH2YOL090W SWI4P25302 1093 aaKnown RBP3.4□□□□□ -1.87
MSH2YOL090W SSZ1P38788 538 aaKnown RBP3.4□□□□□ -1.87
MSH2YOL090W RLP7P40693 322 aaKnown RBP3.4□□□□□ -1.87
MSH2YOL090W GCD10P41814 478 aa3.4□□□□□ -1.87
MSH2YOL090W CIR1P42940 261 aa3.4□□□□□ -1.87
MSH2YOL090W TIM50Q02776 476 aa3.4□□□□□ -1.87
MSH2YOL090W YCG1Q06680 1035 aa3.4□□□□□ -1.87
MSH2YOL090W YLR149CQ99296 730 aa3.4□□□□□ -1.87
MSH2YOL090W SUI3P09064 285 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W CMP2P14747 604 aa3.39□□□□□ -1.87
MSH2YOL090W PFK2P16862 959 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
MSH2YOL090W ACO1P19414 778 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
MSH2YOL090W CLB4P24871 460 aa3.39□□□□□ -1.87
MSH2YOL090W KIP1P28742 1111 aa3.39□□□□□ -1.87
MSH2YOL090W NAM7P30771 971 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W MDL1P33310 695 aa3.39□□□□□ -1.87
MSH2YOL090W YKR018CP36114 725 aa3.39□□□□□ -1.87
MSH2YOL090W GLY1P37303 387 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W SRP68P38687 599 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W PSF2P40359 213 aa3.39□□□□□ -1.87
MSH2YOL090W SPO22P40511 975 aa3.39□□□□□ -1.87
MSH2YOL090W YIR007WP40566 764 aa3.39□□□□□ -1.87
MSH2YOL090W VPS75P53853 264 aa3.39□□□□□ -1.87
MSH2YOL090W NOP15P53927 220 aaPredicted RBP3.39□□□□□ -1.87
MSH2YOL090W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
MSH2YOL090W LEE1Q02799 301 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W ARP9Q05123 467 aa3.39□□□□□ -1.87
MSH2YOL090W PHO5P00635 467 aa3.39□□□□□ -1.87
MSH2YOL090W VAS1P07806 1104 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W POL3P15436 1097 aa3.39□□□□□ -1.87
MSH2YOL090W BET2P20133 325 aa3.39□□□□□ -1.87
MSH2YOL090W MET22P32179 357 aa3.39□□□□□ -1.87
MSH2YOL090W PRO1P32264 428 aa3.39□□□□□ -1.87
MSH2YOL090W MF(ALPHA)2P32435 120 aa3.39□□□□□ -1.87
MSH2YOL090W PPE1P38796 400 aa3.39□□□□□ -1.87
MSH2YOL090W GYP7P48365 746 aa3.39□□□□□ -1.87
MSH2YOL090W NIT3P49954 291 aa3.39□□□□□ -1.87
MSH2YOL090W LYS5P50113 272 aa3.39□□□□□ -1.87
MSH2YOL090W BRE5P53741 515 aaKnown RBP3.39□□□□□ -1.87
MSH2YOL090W ELA1P53861 379 aaPredicted RBP3.39□□□□□ -1.87
MSH2YOL090W RNH1Q04740 348 aa3.39□□□□□ -1.87
MSH2YOL090W PSF3Q12146 194 aa3.39□□□□□ -1.87
MSH2YOL090W YEL076C-AP0CX16 216 aa3.38□□□□□ -1.87
MSH2YOL090W YLR464WP0CX17 216 aa3.38□□□□□ -1.87
MSH2YOL090W ADK2P26364 225 aa3.38□□□□□ -1.87
MSH2YOL090W PPQ1P32945 549 aa3.38□□□□□ -1.87
MSH2YOL090W CTF13P35203 478 aa3.38□□□□□ -1.87
MSH2YOL090W GPB2P39717 880 aa3.38□□□□□ -1.87
MSH2YOL090W YEL076CP39971 216 aa3.38□□□□□ -1.87
MSH2YOL090W SEC28P40509 296 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms