RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	CKI1	P20485	582 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	SEC14	P24280	304 aa	Known RBP	4.56	□□□□□ -1.68
TRF5	YNL299W	HIR1	P32479	840 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	YEL1	P34225	687 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	DEF1	P35732	738 aa	Known RBP	4.56	□□□□□ -1.68
TRF5	YNL299W	YKR018C	P36114	725 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	LAS1	P36146	502 aa	Predicted RBP	4.56	□□□□□ -1.68
TRF5	YNL299W	STV1	P37296	890 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	HSE1	P38753	452 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	PCI8	P40512	444 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	YFL054C	P43549	646 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	TFC6	Q06339	672 aa		4.56	□□□□□ -1.68
TRF5	YNL299W	HIS4	P00815	799 aa	Known RBP	4.55	□□□□□ -1.68
TRF5	YNL299W	KRS1	P15180	591 aa	Known RBP	4.55	□□□□□ -1.68
TRF5	YNL299W	SFL1	P20134	766 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	PWP2	P25635	923 aa	Known RBP	4.55	□□□□□ -1.68
TRF5	YNL299W	FUI1	P38196	639 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	RTS1	P38903	757 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	IES1	P43579	692 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	VPS4	P52917	437 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	MTC3	P53077	123 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	YGR117C	P53270	476 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	TRM44	Q02648	567 aa	Known RBP	4.55	□□□□□ -1.68
TRF5	YNL299W	HFD1	Q04458	532 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	YLR257W	Q06146	321 aa	Known RBP	4.55	□□□□□ -1.68
TRF5	YNL299W	CMS1	Q07897	291 aa	Known RBP	4.55	□□□□□ -1.68
TRF5	YNL299W	SMC6	Q12749	1114 aa		4.55	□□□□□ -1.68
TRF5	YNL299W	ARG4	P04076	463 aa	Predicted RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	SAC7	P17121	654 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	PLC1	P32383	869 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	REC104	P33323	182 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	PGM2	P37012	569 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	RXT2	P38255	430 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	ERG7	P38604	731 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	YMR124W	P39523	943 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	RPN3	P40016	523 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	PXA1	P41909	870 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	CAF16	P43569	289 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	YJR096W	P47137	282 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	YGR035C	P53222	116 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	YNL034W	P53963	612 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	YNL018C	P53976	612 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	RPS15	Q01855	142 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	SRP1	Q02821	542 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	URH1	Q04179	340 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	VTI1	Q04338	217 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	ACM1	Q08981	209 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	NBL1	Q3E7Y6	73 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	GFA1	P14742	717 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	PRO1	P32264	428 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	MYO3	P36006	1272 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	MAE1	P36013	669 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	PCM1	P38628	557 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	NMD3	P38861	518 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	RRP8	P38961	392 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	CCM1	P48237	864 aa	Predicted RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	NCS2	P53923	493 aa	Predicted RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	ADA2	Q02336	434 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	ATP25	Q03153	612 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	DOT1	Q04089	582 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	YMR114C	Q04471	368 aa	Known RBP	4.54	□□□□□ -1.68
TRF5	YNL299W	RSC3	Q06639	885 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	YAP7	Q08182	245 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	PCL8	Q08966	492 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	ENV7	Q12003	364 aa		4.54	□□□□□ -1.68
TRF5	YNL299W	ATP4	P05626	244 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	HXT1	P32465	570 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	ZUO1	P32527	433 aa	Known RBP	4.53	□□□□□ -1.68
TRF5	YNL299W	GCG1	P32656	232 aa	Known RBP	4.53	□□□□□ -1.68
TRF5	YNL299W	YME2	P32843	850 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	EMC3	P36039	253 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	MCD4	P36051	919 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	TSL1	P38427	1098 aa	Known RBP	4.53	□□□□□ -1.68
TRF5	YNL299W	SIP3	P38717	1229 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	NPP2	P39997	493 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	YJL045W	P47052	634 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	RPT6	Q01939	405 aa	Known RBP	4.53	□□□□□ -1.68
TRF5	YNL299W	YLR177W	Q06251	628 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	SIL1	Q08199	421 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	YPL216W	Q08964	1102 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	KEL3	Q08979	651 aa	Predicted RBP	4.53	□□□□□ -1.68
TRF5	YNL299W	YOR111W	Q99210	232 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	RAD61	Q99359	647 aa		4.53	□□□□□ -1.68
TRF5	YNL299W	THS1	P04801	734 aa	Known RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	PYC1	P11154	1178 aa	Known RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	KAR1	P11927	433 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	ALG1	P16661	449 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	HPR1	P17629	752 aa	Known RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	CDC10	P25342	322 aa	Known RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	RAD51	P25454	400 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	ANP1	P32629	500 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
TRF5	YNL299W	OAF3	P36023	863 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	MAL31	P38156	614 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	ALG14	P38242	237 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	SPP381	P38282	291 aa	Predicted RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	YBR238C	P38330	731 aa	Known RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	TDA3	P38758	523 aa		4.52	□□□□□ -1.69
TRF5	YNL299W	SET5	P38890	526 aa	Known RBP	4.52	□□□□□ -1.69
TRF5	YNL299W	CCT2	P39076	527 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms