RNA–Protein interactions for RNA: YNL292W

PUS4, Transcript of Pseudouridine synthase, yeast

Gene PUS4, Length 1,212 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS4	YNL292W	NOP4	P37838	685 aa	Known RBP	7.36	□□□□□ -1.23
PUS4	YNL292W	RPT2	P40327	437 aa	Known RBP	7.36	□□□□□ -1.23
PUS4	YNL292W	YPS6	P40583	537 aa		7.36	□□□□□ -1.23
PUS4	YNL292W	TFG1	P41895	735 aa	Predicted RBP	7.36	□□□□□ -1.23
PUS4	YNL292W	MND1	P53102	219 aa		7.36	□□□□□ -1.23
PUS4	YNL292W	YNL144C	P53907	740 aa		7.36	□□□□□ -1.23
PUS4	YNL292W	PEX13	P80667	386 aa		7.36	□□□□□ -1.23
PUS4	YNL292W	SPP382	Q06411	708 aa	Predicted RBP	7.36	□□□□□ -1.23
PUS4	YNL292W	AI5_BETA	Q9ZZX0	354 aa		7.36	□□□□□ -1.23
PUS4	YNL292W	ENO2	P00925	437 aa	Known RBP	7.35	□□□□□ -1.23
PUS4	YNL292W	DAL2	P25335	343 aa		7.35	□□□□□ -1.23
PUS4	YNL292W	YBR053C	P38235	358 aa		7.35	□□□□□ -1.23
PUS4	YNL292W	PYK2	P52489	506 aa	Known RBP	7.35	□□□□□ -1.23
PUS4	YNL292W	FLC3	P53121	802 aa		7.35	□□□□□ -1.23
PUS4	YNL292W	DRN1	P53255	507 aa	Known RBP	7.35	□□□□□ -1.23
PUS4	YNL292W	YPL062W	Q02781	134 aa		7.35	□□□□□ -1.23
PUS4	YNL292W	ECM38	Q05902	660 aa	Predicted RBP	7.35	□□□□□ -1.23
PUS4	YNL292W	RSB1	Q08417	382 aa		7.35	□□□□□ -1.23
PUS4	YNL292W	NDD1	Q08887	554 aa		7.35	□□□□□ -1.23
PUS4	YNL292W	SLY41	P22215	453 aa		7.34	□□□□□ -1.23
PUS4	YNL292W	YJR061W	P40355	935 aa		7.34	□□□□□ -1.23
PUS4	YNL292W	FIG4	P42837	879 aa		7.34	□□□□□ -1.23
PUS4	YNL292W	MNN10	P50108	393 aa	Known RBP	7.34	□□□□□ -1.23
PUS4	YNL292W	TRM112	P53738	135 aa	Predicted RBP	7.34	□□□□□ -1.23
PUS4	YNL292W	GPD1	Q00055	391 aa	Known RBP	7.34	□□□□□ -1.23
PUS4	YNL292W	YMR206W	Q03695	313 aa		7.34	□□□□□ -1.23
PUS4	YNL292W	VMS1	Q04311	632 aa	Known RBP	7.34	□□□□□ -1.23
PUS4	YNL292W	HRQ1	Q05549	1077 aa		7.34	□□□□□ -1.23
PUS4	YNL292W	MDM38	Q08179	573 aa		7.34	□□□□□ -1.23
PUS4	YNL292W	RTK1	Q12100	620 aa	Predicted RBP	7.34	□□□□□ -1.23
PUS4	YNL292W	SNF5	P18480	905 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	SPT5	P27692	1063 aa	Known RBP	7.33	□□□□□ -1.24
PUS4	YNL292W	CDC3	P32457	520 aa	Known RBP	7.33	□□□□□ -1.24
PUS4	YNL292W	CSG2	P35206	410 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	ABZ1	P37254	787 aa	Predicted RBP	7.33	□□□□□ -1.24
PUS4	YNL292W	TIF34	P40217	347 aa	Known RBP	7.33	□□□□□ -1.24
PUS4	YNL292W	PRK1	P40494	810 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	DUG1	P43616	481 aa	Known RBP	7.33	□□□□□ -1.24
PUS4	YNL292W	HFM1	P51979	1187 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	AQR1	P53943	586 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	YMR187C	Q03236	431 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	RPN4	Q03465	531 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	ARO80	Q04052	950 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	DIS3	Q08162	1001 aa	Known RBP	7.33	□□□□□ -1.24
PUS4	YNL292W	SIL1	Q08199	421 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	ARP7	Q12406	477 aa		7.33	□□□□□ -1.24
PUS4	YNL292W	SEC63	P14906	663 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	MET22	P32179	357 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	LEU5	P38702	357 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	YEL075C	P39972	122 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	YGR237C	P50089	785 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	NUP84	P52891	726 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	CLU1	Q03690	1277 aa	Known RBP	7.32	□□□□□ -1.24
PUS4	YNL292W	YCS4	Q06156	1176 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	PMT7	Q06644	662 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	NOB1	Q08444	459 aa	Known RBP	7.32	□□□□□ -1.24
PUS4	YNL292W	AFT2	Q08957	416 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	SVS1	Q12254	260 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	HFA1	P32874	2273 aa		7.32	□□□□□ -1.24
PUS4	YNL292W	JIP3	O13555	125 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	CCP1	P00431	361 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	CBR1	P38626	284 aa	Known RBP	7.31	□□□□□ -1.24
PUS4	YNL292W	CTM1	P38818	585 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	PFS1	P38872	237 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	SER33	P40510	469 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	TAF9	Q05027	157 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	YLR297W	Q05899	129 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	YSH1	Q06224	779 aa	Predicted RBP	7.31	□□□□□ -1.24
PUS4	YNL292W	TRS33	Q99394	268 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	CSF1	Q12150	2958 aa		7.31	□□□□□ -1.24
PUS4	YNL292W	ENO1	P00924	437 aa	Known RBP	7.3	□□□□□ -1.24
PUS4	YNL292W	YMC2	P38087	329 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	URA8	P38627	578 aa	Predicted RBP	7.3	□□□□□ -1.24
PUS4	YNL292W	DYS1	P38791	387 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	EXO1	P39875	702 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	STU2	P46675	888 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	AIP1	P46680	615 aa	Known RBP	7.3	□□□□□ -1.24
PUS4	YNL292W	YJR079W	P47126	109 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	COS5	P47187	383 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	COQ5	P49017	307 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	PRP24	P49960	444 aa	Known RBP	7.3	□□□□□ -1.24
PUS4	YNL292W	RSC1	P53236	928 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	CSR1	Q06705	408 aa	Known RBP	7.3	□□□□□ -1.24
PUS4	YNL292W	APC5	Q08683	685 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	BMT6	Q12291	365 aa		7.3	□□□□□ -1.24
PUS4	YNL292W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	7.29	□□□□□ -1.24	not detected
PUS4	YNL292W	PPR1	P07272	904 aa	Predicted RBP	7.29	□□□□□ -1.24
PUS4	YNL292W	RPC25	P35718	212 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	YKT6	P36015	200 aa	Known RBP	7.29	□□□□□ -1.24
PUS4	YNL292W	BCD1	P38772	366 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	CRP1	P38845	465 aa	Known RBP	7.29	□□□□□ -1.24
PUS4	YNL292W	YER130C	P39959	443 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	BST1	P43571	1029 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	NAM8	Q00539	523 aa	Known RBP	7.29	□□□□□ -1.24
PUS4	YNL292W	COG4	Q06096	861 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	LCB5	Q06147	687 aa	Known RBP	7.29	□□□□□ -1.24
PUS4	YNL292W	YAP7	Q08182	245 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	PEX15	Q08215	383 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	HMI1	Q12039	706 aa		7.29	□□□□□ -1.24
PUS4	YNL292W	PER33	Q12144	273 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms