RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	UTP18	P40362	594 aa	Predicted RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	INP51	P40559	946 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	RGD2	P43556	714 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	NAN1	Q02931	896 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	YMR187C	Q03236	431 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	CSM3	Q04659	317 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	GLO2	Q05584	274 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MRX10	Q05648	414 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	IWR1	Q07532	353 aa	Predicted RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	GYP1	Q08484	637 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MCH5	Q08777	521 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	TAF3	Q12297	353 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	DUR1,2	P32528	1835 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	RPL17A	P05740	184 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	COR1	P07256	457 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	PHO4	P07270	312 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	PET494	P07390	489 aa	Predicted RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	ILS1	P09436	1072 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	VPS33	P20795	691 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MEI4	P29467	408 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	IRE1	P32361	1115 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	NUP2	P32499	720 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	OCT1	P35999	772 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	KEL1	P38853	1164 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	RGA1	P39083	1007 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MGS1	P40151	587 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	CSM2	P40465	213 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MSE1	P48525	536 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	CBK1	P53894	756 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	FAR11	P53917	953 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	HXT15	P54854	567 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	SWP1	Q02795	286 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	ASA1	Q06822	443 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	VPS54	Q12071	889 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	RAD59	Q12223	238 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	APC2	Q12440	853 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	LSO2	Q3E772	92 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	RPB4	P20433	221 aa	Predicted RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	DBF4	P32325	704 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	NGR1	P32831	672 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	PAM1	P37304	830 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	POP4	P38336	279 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	SMF2	P38778	549 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	FTR1	P40088	404 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	DSE4	P53753	1117 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	BNI5	P53890	448 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	DML1	Q03652	475 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	CLU1	Q03690	1277 aa	Known RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	TAF12	Q03761	539 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	YDR239C	Q03780	787 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	SSQ1	Q05931	657 aa	Predicted RBP	4.37	□□□□□ -1.71
VAC7	YNL054W	MLC2	Q06580	163 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MLH2	Q07980	695 aa		4.37	□□□□□ -1.71
VAC7	YNL054W	MET17	P06106	444 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	TSR4	P25040	408 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	RRT12	P25381	491 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	ANP1	P32629	500 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	TRZ1	P36159	838 aa	Predicted RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	EXO5	P38289	585 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
VAC7	YNL054W	YJL055W	P47044	245 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	LIA1	P47120	325 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	CGR1	P53188	120 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	YGR054W	P53235	642 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	KTR5	P53966	522 aa	Predicted RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	LOT6	Q07923	191 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	PPM2	Q08282	695 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	DNL4	Q08387	944 aa	Predicted RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	LDB17	Q12342	491 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	YIL002W-A	Q3E7Z5	69 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	CDC31	P06704	161 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	ERG12	P07277	443 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	RED1	P14291	827 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	ALG1	P16661	449 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	PRR1	P28708	518 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	VPS51	P36116	164 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	NTR2	P36118	322 aa	Predicted RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	PGM2	P37012	569 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	YBR032W	P38223	100 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	MTG2	P38860	518 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	STT3	P39007	718 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	YMR134W	P40207	237 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	STB4	P50104	949 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	YML6	P51998	286 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	ESBP6	P53918	673 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	RPS15	Q01855	142 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	RSC4	Q02206	625 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	SMP3	Q04174	516 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	TDA9	Q04545	1251 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	INM2	Q05533	292 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
VAC7	YNL054W	ILV2	P07342	687 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	FUS1	P11710	512 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	NMT1	P14743	455 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	SAC1	P32368	623 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	DUR3	P33413	735 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	NCL1	P38205	684 aa	Known RBP	4.36	□□□□□ -1.71
VAC7	YNL054W	TDP1	P38319	544 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	VMA7	P39111	118 aa		4.36	□□□□□ -1.71
VAC7	YNL054W	YRB2	P40517	327 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms