RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W REC104P33323 182 aa4.29□□□□□ -1.72
PUB1YNL016W PGM2P37012 569 aaKnown RBP4.29□□□□□ -1.72
PUB1YNL016W ALG3P38179 458 aa4.29□□□□□ -1.72
PUB1YNL016W AXL2P38928 823 aa4.29□□□□□ -1.72
PUB1YNL016W SET2P46995 733 aaKnown RBP4.29□□□□□ -1.72
PUB1YNL016W PPT1P53043 513 aa4.29□□□□□ -1.72
PUB1YNL016W TAD1P53065 400 aa4.29□□□□□ -1.72
PUB1YNL016W RRP46P53256 223 aaPredicted RBP4.29□□□□□ -1.72
PUB1YNL016W YHM2Q04013 314 aa4.29□□□□□ -1.72
PUB1YNL016W NHX1Q04121 633 aa4.29□□□□□ -1.72
PUB1YNL016W TFC6Q06339 672 aa4.29□□□□□ -1.72
PUB1YNL016W ENV7Q12003 364 aa4.29□□□□□ -1.72
PUB1YNL016W RVB2Q12464 471 aaKnown RBP4.29□□□□□ -1.72
PUB1YNL016W PGA3Q12746 312 aaKnown RBP4.29□□□□□ -1.72
PUB1YNL016W SMC6Q12749 1114 aa4.29□□□□□ -1.72
PUB1YNL016W COQ4O13525 335 aa4.28□□□□□ -1.72
PUB1YNL016W ILS1P09436 1072 aaKnown RBP4.28□□□□□ -1.72
PUB1YNL016W DAL7P21826 554 aa4.28□□□□□ -1.72
PUB1YNL016W RPS7AP26786 190 aaKnown RBP4.28□□□□□ -1.72
PUB1YNL016W SLC1P33333 303 aa4.28□□□□□ -1.72
PUB1YNL016W EBP2P36049 427 aaKnown RBP4.28□□□□□ -1.72
PUB1YNL016W AHP1P38013 176 aaKnown RBP4.28□□□□□ -1.72
PUB1YNL016W ARL1P38116 183 aaKnown RBP4.28□□□□□ -1.72
PUB1YNL016W RRF1P38771 230 aa4.28□□□□□ -1.72
PUB1YNL016W LAM1P38851 1228 aa4.28□□□□□ -1.72
PUB1YNL016W PSF2P40359 213 aa4.28□□□□□ -1.72
PUB1YNL016W YIL166CP40445 542 aa4.28□□□□□ -1.72
PUB1YNL016W VHR1P40522 640 aa4.28□□□□□ -1.72
PUB1YNL016W SMK1P41808 388 aa4.28□□□□□ -1.72
PUB1YNL016W RMD8P43620 662 aa4.28□□□□□ -1.72
PUB1YNL016W CCM1P48237 864 aaPredicted RBP4.28□□□□□ -1.72
PUB1YNL016W ENV11P53246 860 aa4.28□□□□□ -1.72
PUB1YNL016W YNR040WP53736 256 aa4.28□□□□□ -1.72
PUB1YNL016W PTA1Q01329 785 aaPredicted RBP4.28□□□□□ -1.72
PUB1YNL016W VID22Q05934 901 aa4.28□□□□□ -1.72
PUB1YNL016W SPP382Q06411 708 aaPredicted RBP4.28□□□□□ -1.72
PUB1YNL016W ADY3Q07732 790 aa4.28□□□□□ -1.72
PUB1YNL016W RPS21BQ3E754 87 aaKnown RBP4.28□□□□□ -1.72
PUB1YNL016W CDC16P09798 840 aa4.27□□□□□ -1.73
PUB1YNL016W RED1P14291 827 aa4.27□□□□□ -1.73
PUB1YNL016W PDX1P16451 410 aa4.27□□□□□ -1.73
PUB1YNL016W HCA4P20448 770 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W PER1P25625 357 aa4.27□□□□□ -1.73
PUB1YNL016W MGM1P32266 881 aa4.27□□□□□ -1.73
PUB1YNL016W DPH2P32461 534 aa4.27□□□□□ -1.73
PUB1YNL016W TFA2P36145 328 aa4.27□□□□□ -1.73
PUB1YNL016W DUN1P39009 513 aa4.27□□□□□ -1.73
PUB1YNL016W YEL068CP39977 110 aa4.27□□□□□ -1.73
PUB1YNL016W LSM5P40089 93 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W SLS1P42900 643 aa4.27□□□□□ -1.73
PUB1YNL016W BNA2P47125 453 aa4.27□□□□□ -1.73
PUB1YNL016W HXT16P47185 567 aa4.27□□□□□ -1.73
PUB1YNL016W RNR4P49723 345 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W YGR250CP53316 781 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W YDR514CQ04408 483 aa4.27□□□□□ -1.73
PUB1YNL016W UTP21Q06078 939 aaPredicted RBP4.27□□□□□ -1.73
PUB1YNL016W RSC2Q06488 889 aa4.27□□□□□ -1.73
PUB1YNL016W OMS1Q06668 471 aa4.27□□□□□ -1.73
PUB1YNL016W THI3Q07471 609 aa4.27□□□□□ -1.73
PUB1YNL016W BMS1Q08965 1183 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PUB1YNL016W FLO1P32768 1537 aa4.27□□□□□ -1.73
PUB1YNL016W SNF1P06782 633 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W PFK2P16862 959 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PUB1YNL016W UBC1P21734 215 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W ATP12P22135 325 aa4.27□□□□□ -1.73
PUB1YNL016W PHO3P24031 467 aa4.27□□□□□ -1.73
PUB1YNL016W DBP2P24783 546 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W LCB1P25045 558 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W RPT3P33298 428 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W APM3P38153 483 aa4.27□□□□□ -1.73
PUB1YNL016W FAT1P38225 669 aa4.27□□□□□ -1.73
PUB1YNL016W YHR218WP38899 603 aa4.27□□□□□ -1.73
PUB1YNL016W SAW1P39735 261 aa4.27□□□□□ -1.73
PUB1YNL016W YIL092WP40497 633 aa4.27□□□□□ -1.73
PUB1YNL016W VPS62P53285 467 aa4.27□□□□□ -1.73
PUB1YNL016W BIO5P53744 561 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W MRPL13Q02204 264 aa4.27□□□□□ -1.73
PUB1YNL016W IRC4Q03036 179 aa4.27□□□□□ -1.73
PUB1YNL016W ISA1Q07821 250 aaPredicted RBP4.27□□□□□ -1.73
PUB1YNL016W LAP2Q10740 671 aa4.27□□□□□ -1.73
PUB1YNL016W NUR1Q12066 484 aa4.27□□□□□ -1.73
PUB1YNL016W DBP10Q12389 995 aaKnown RBP4.27□□□□□ -1.73
PUB1YNL016W SWI1P09547 1314 aa4.27□□□□□ -1.73
PUB1YNL016W YMR084WA2P2R3 262 aa4.26□□□□□ -1.73
PUB1YNL016W RPP1AP05318 106 aaPredicted RBP4.26□□□□□ -1.73
PUB1YNL016W RPL11AP0C0W9 174 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W GUK1P15454 187 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W NCP1P16603 691 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W CBF2P32504 956 aa4.26□□□□□ -1.73
PUB1YNL016W BYE1P36106 594 aa4.26□□□□□ -1.73
PUB1YNL016W HSL7P38274 827 aa4.26□□□□□ -1.73
PUB1YNL016W PPE1P38796 400 aa4.26□□□□□ -1.73
PUB1YNL016W RPN10P38886 268 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W POP2P39008 433 aa4.26□□□□□ -1.73
PUB1YNL016W MXR1P40029 184 aa4.26□□□□□ -1.73
PUB1YNL016W MAM1P40065 302 aa4.26□□□□□ -1.73
PUB1YNL016W INP51P40559 946 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W SAC3P46674 1301 aa4.26□□□□□ -1.73
PUB1YNL016W YJR124CP47159 448 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms