RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W PER1P25625 357 aa5.36□□□□□ -1.55
ROT1YMR200W EBP2P36049 427 aaKnown RBP5.36□□□□□ -1.55
ROT1YMR200W PPE1P38796 400 aa5.36□□□□□ -1.55
ROT1YMR200W LRP1P38801 184 aaKnown RBP5.36□□□□□ -1.55
ROT1YMR200W CEP3P40969 608 aa5.36□□□□□ -1.55
ROT1YMR200W BNA2P47125 453 aa5.36□□□□□ -1.55
ROT1YMR200W PTA1Q01329 785 aaPredicted RBP5.36□□□□□ -1.55
ROT1YMR200W YKR011CQ02209 353 aa5.36□□□□□ -1.55
ROT1YMR200W YDR341CQ05506 607 aaKnown RBP5.36□□□□□ -1.55
ROT1YMR200W RRP9Q06506 573 aaKnown RBP5.36□□□□□ -1.55
ROT1YMR200W YOL073CQ08232 322 aa5.36□□□□□ -1.55
ROT1YMR200W YPL191CQ08930 360 aa5.36□□□□□ -1.55
ROT1YMR200W SES1P07284 462 aaKnown RBP5.35□□□□□ -1.55
ROT1YMR200W TRP4P07285 380 aaPredicted RBP5.35□□□□□ -1.55
ROT1YMR200W TUB3P09734 445 aaKnown RBP5.35□□□□□ -1.55
ROT1YMR200W MOH1P38191 138 aa5.35□□□□□ -1.55
ROT1YMR200W CTF8P38877 133 aa5.35□□□□□ -1.55
ROT1YMR200W IRC6P43615 237 aa5.35□□□□□ -1.55
ROT1YMR200W DAM1P53267 343 aa5.35□□□□□ -1.55
ROT1YMR200W ATP25Q03153 612 aa5.35□□□□□ -1.55
ROT1YMR200W NHX1Q04121 633 aa5.35□□□□□ -1.55
ROT1YMR200W HLR1Q04429 423 aa5.35□□□□□ -1.55
ROT1YMR200W NUR1Q12066 484 aa5.35□□□□□ -1.55
ROT1YMR200W ERG4P25340 473 aa5.34□□□□□ -1.55
ROT1YMR200W RPC53P25441 422 aa5.34□□□□□ -1.55
ROT1YMR200W DBF4P32325 704 aa5.34□□□□□ -1.55
ROT1YMR200W ORC2P32833 620 aa5.34□□□□□ -1.55
ROT1YMR200W TYE7P33122 291 aaPredicted RBP5.34□□□□□ -1.55
ROT1YMR200W XRS2P33301 854 aa5.34□□□□□ -1.55
ROT1YMR200W EMC3P36039 253 aa5.34□□□□□ -1.55
ROT1YMR200W BYE1P36106 594 aa5.34□□□□□ -1.55
ROT1YMR200W SUL1P38359 859 aa5.34□□□□□ -1.55
ROT1YMR200W HXT6P39003 570 aaKnown RBP5.34□□□□□ -1.55
ROT1YMR200W HXT7P39004 570 aa5.34□□□□□ -1.55
ROT1YMR200W TPA1P40032 644 aaKnown RBP5.34□□□□□ -1.55
ROT1YMR200W YIL166CP40445 542 aa5.34□□□□□ -1.55
ROT1YMR200W DPH1P40487 425 aaKnown RBP5.34□□□□□ -1.55
ROT1YMR200W YNL058CP53947 316 aa5.34□□□□□ -1.55
ROT1YMR200W GIS1Q03833 894 aa5.34□□□□□ -1.55
ROT1YMR200W YDR514CQ04408 483 aa5.34□□□□□ -1.55
ROT1YMR200W YCG1Q06680 1035 aa5.34□□□□□ -1.55
ROT1YMR200W ENV7Q12003 364 aa5.34□□□□□ -1.55
ROT1YMR200W HOP1P20050 605 aa5.33□□□□□ -1.56
ROT1YMR200W CCR4P31384 837 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W NGG1P32494 702 aa5.33□□□□□ -1.56
ROT1YMR200W RPT3P33298 428 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W OAR1P35731 278 aa5.33□□□□□ -1.56
ROT1YMR200W HSL7P38274 827 aa5.33□□□□□ -1.56
ROT1YMR200W RPN10P38886 268 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W AXL2P38928 823 aa5.33□□□□□ -1.56
ROT1YMR200W SAW1P39735 261 aa5.33□□□□□ -1.56
ROT1YMR200W MAM1P40065 302 aa5.33□□□□□ -1.56
ROT1YMR200W AXL1P40851 1208 aa5.33□□□□□ -1.56
ROT1YMR200W SET2P46995 733 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W RNR4P49723 345 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W ARC35P53731 342 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W GRX3Q03835 250 aa5.33□□□□□ -1.56
ROT1YMR200W PEX19Q07418 342 aa5.33□□□□□ -1.56
ROT1YMR200W HFI1Q12060 488 aa5.33□□□□□ -1.56
ROT1YMR200W RPS21BQ3E754 87 aaKnown RBP5.33□□□□□ -1.56
ROT1YMR200W PRP4P20053 465 aaKnown RBP5.32□□□□□ -1.56
ROT1YMR200W MTH1P35198 433 aa5.32□□□□□ -1.56
ROT1YMR200W OAF3P36023 863 aa5.32□□□□□ -1.56
ROT1YMR200W APM3P38153 483 aa5.32□□□□□ -1.56
ROT1YMR200W RIC1P40395 1056 aa5.32□□□□□ -1.56
ROT1YMR200W YIL092WP40497 633 aa5.32□□□□□ -1.56
ROT1YMR200W SAE2P46946 345 aa5.32□□□□□ -1.56
ROT1YMR200W UBC9P50623 157 aaPredicted RBP5.32□□□□□ -1.56
ROT1YMR200W MRPL13Q02204 264 aa5.32□□□□□ -1.56
ROT1YMR200W OMS1Q06668 471 aa5.32□□□□□ -1.56
ROT1YMR200W ARP7Q12406 477 aa5.32□□□□□ -1.56
ROT1YMR200W SEM1O94742 89 aa5.31□□□□□ -1.56
ROT1YMR200W STF1P01098 86 aa5.31□□□□□ -1.56
ROT1YMR200W SNF1P06782 633 aaKnown RBP5.31□□□□□ -1.56
ROT1YMR200W NUC1P08466 329 aa5.31□□□□□ -1.56
ROT1YMR200W RED1P14291 827 aa5.31□□□□□ -1.56
ROT1YMR200W GUK1P15454 187 aaKnown RBP5.31□□□□□ -1.56
ROT1YMR200W PHO3P24031 467 aa5.31□□□□□ -1.56
ROT1YMR200W NPL6P32832 435 aa5.31□□□□□ -1.56
ROT1YMR200W SPC72P39723 622 aa5.31□□□□□ -1.56
ROT1YMR200W NIT3P49954 291 aa5.31□□□□□ -1.56
ROT1YMR200W CBK1P53894 756 aa5.31□□□□□ -1.56
ROT1YMR200W UTP21Q06078 939 aaPredicted RBP5.31□□□□□ -1.56
ROT1YMR200W DBP10Q12389 995 aaKnown RBP5.31□□□□□ -1.56
ROT1YMR200W APM4Q99186 491 aa5.31□□□□□ -1.56
ROT1YMR200W CDC16P09798 840 aa5.3□□□□□ -1.56
ROT1YMR200W PDX1P16451 410 aa5.3□□□□□ -1.56
ROT1YMR200W ATP12P22135 325 aa5.3□□□□□ -1.56
ROT1YMR200W CTF13P35203 478 aa5.3□□□□□ -1.56
ROT1YMR200W YHR078WP38799 552 aa5.3□□□□□ -1.56
ROT1YMR200W YHR218WP38899 603 aa5.3□□□□□ -1.56
ROT1YMR200W CIR1P42940 261 aa5.3□□□□□ -1.56
ROT1YMR200W ALY2P47029 1046 aa5.3□□□□□ -1.56
ROT1YMR200W MRPS35P53292 345 aa5.3□□□□□ -1.56
ROT1YMR200W MFB1Q04922 465 aa5.3□□□□□ -1.56
ROT1YMR200W VID22Q05934 901 aa5.3□□□□□ -1.56
ROT1YMR200W SMF3Q12078 473 aaPredicted RBP5.3□□□□□ -1.56
ROT1YMR200W DCS2Q12123 353 aa5.3□□□□□ -1.56
ROT1YMR200W RPS9AO13516 197 aaKnown RBP5.29□□□□□ -1.56
ROT1YMR200W LEU2P04173 364 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms