RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W FDC1Q03034 503 aa3.34□□□□□ -1.87
PKR1YMR123W NGL2Q03264 515 aaKnown RBP3.34□□□□□ -1.87
PKR1YMR123W YDR179W-AQ03983 463 aa3.34□□□□□ -1.87
PKR1YMR123W YHM2Q04013 314 aa3.34□□□□□ -1.87
PKR1YMR123W HFD1Q04458 532 aa3.34□□□□□ -1.87
PKR1YMR123W TPK2P06245 380 aa3.33□□□□□ -1.88
PKR1YMR123W ACO1P19414 778 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
PKR1YMR123W VPS34P22543 875 aa3.33□□□□□ -1.88
PKR1YMR123W SAT4P25333 603 aaKnown RBP3.33□□□□□ -1.88
PKR1YMR123W UGP1P32861 499 aaKnown RBP3.33□□□□□ -1.88
PKR1YMR123W ELF1P36053 145 aa3.33□□□□□ -1.88
PKR1YMR123W PMC1P38929 1173 aaPredicted RBP3.33□□□□□ -1.88
PKR1YMR123W ASN1P49089 572 aaKnown RBP3.33□□□□□ -1.88
PKR1YMR123W MRI1Q06489 411 aaKnown RBP3.33□□□□□ -1.88
PKR1YMR123W SLK19Q08581 821 aaKnown RBP3.33□□□□□ -1.88
PKR1YMR123W MDM20Q12387 796 aaKnown RBP3.33□□□□□ -1.88
PKR1YMR123W GLN4P13188 809 aaKnown RBP3.32□□□□□ -1.88
PKR1YMR123W STE12P13574 688 aa3.32□□□□□ -1.88
PKR1YMR123W CDC26P14724 124 aa3.32□□□□□ -1.88
PKR1YMR123W STE4P18851 423 aa3.32□□□□□ -1.88
PKR1YMR123W RPA135P22138 1203 aaKnown RBP3.32□□□□□ -1.88
PKR1YMR123W FAT1P38225 669 aa3.32□□□□□ -1.88
PKR1YMR123W CRG1P38892 291 aaRIP-Chip data3.32□□□□□ -1.88not detected
PKR1YMR123W TMN3P40071 706 aa3.32□□□□□ -1.88
PKR1YMR123W FTR1P40088 404 aa3.32□□□□□ -1.88
PKR1YMR123W VID28P40547 921 aa3.32□□□□□ -1.88
PKR1YMR123W ENP2P48234 707 aaKnown RBP3.32□□□□□ -1.88
PKR1YMR123W YGR237CP50089 785 aa3.32□□□□□ -1.88
PKR1YMR123W YGL081WP53156 320 aa3.32□□□□□ -1.88
PKR1YMR123W CEF1Q03654 590 aaPredicted RBP3.32□□□□□ -1.88
PKR1YMR123W THI7Q05998 598 aa3.32□□□□□ -1.88
PKR1YMR123W RPS21AP0C0V8 87 aaKnown RBP3.31□□□□□ -1.88
PKR1YMR123W HOM2P13663 365 aaKnown RBP3.31□□□□□ -1.88
PKR1YMR123W TUP1P16649 713 aa3.31□□□□□ -1.88
PKR1YMR123W MF(ALPHA)2P32435 120 aa3.31□□□□□ -1.88
PKR1YMR123W ORC2P32833 620 aa3.31□□□□□ -1.88
PKR1YMR123W CDS1P38221 457 aa3.31□□□□□ -1.88
PKR1YMR123W PRM2P40534 656 aa3.31□□□□□ -1.88
PKR1YMR123W OSW1Q08692 278 aa3.31□□□□□ -1.88
PKR1YMR123W FAP7Q12055 197 aaPredicted RBP3.31□□□□□ -1.88
PKR1YMR123W ULA1Q12059 462 aa3.31□□□□□ -1.88
PKR1YMR123W ADE5,7P07244 802 aaKnown RBP3.3□□□□□ -1.88
PKR1YMR123W YMC1P32331 307 aa3.3□□□□□ -1.88
PKR1YMR123W MTC7P32633 139 aa3.3□□□□□ -1.88
PKR1YMR123W MRPL7P36519 292 aa3.3□□□□□ -1.88
PKR1YMR123W THI6P41835 540 aa3.3□□□□□ -1.88
PKR1YMR123W YGL117WP53133 265 aa3.3□□□□□ -1.88
PKR1YMR123W YGR054WP53235 642 aaKnown RBP3.3□□□□□ -1.88
PKR1YMR123W CPR8P53728 308 aa3.3□□□□□ -1.88
PKR1YMR123W HOF1Q05080 669 aa3.3□□□□□ -1.88
PKR1YMR123W PPE1P38796 400 aa3.29□□□□□ -1.88
PKR1YMR123W DUG1P43616 481 aaKnown RBP3.29□□□□□ -1.88
PKR1YMR123W TIM50Q02776 476 aa3.29□□□□□ -1.88
PKR1YMR123W FMP30Q02883 468 aa3.29□□□□□ -1.88
PKR1YMR123W EFR3Q03653 782 aaKnown RBP3.29□□□□□ -1.88
PKR1YMR123W ARG7Q04728 441 aa3.29□□□□□ -1.88
PKR1YMR123W LEU2P04173 364 aaPredicted RBP3.28□□□□□ -1.88
PKR1YMR123W MDM10P18409 493 aa3.28□□□□□ -1.88
PKR1YMR123W HOP1P20050 605 aa3.28□□□□□ -1.88
PKR1YMR123W DGR2P32330 852 aa3.28□□□□□ -1.88
PKR1YMR123W DHR2P36009 735 aaPredicted RBP3.28□□□□□ -1.88
PKR1YMR123W YHR033WP38690 423 aa3.28□□□□□ -1.88
PKR1YMR123W PIH1P38768 344 aa3.28□□□□□ -1.88
PKR1YMR123W UBP12P39538 1254 aa3.28□□□□□ -1.88
PKR1YMR123W YDL183CP48569 320 aa3.28□□□□□ -1.88
PKR1YMR123W RNR4P49723 345 aaKnown RBP3.28□□□□□ -1.88
PKR1YMR123W YIP4P53093 235 aa3.28□□□□□ -1.88
PKR1YMR123W MFM1Q02783 413 aa3.28□□□□□ -1.88
PKR1YMR123W TRS23Q03784 219 aa3.28□□□□□ -1.88
PKR1YMR123W SEG1Q04279 960 aa3.28□□□□□ -1.88
PKR1YMR123W YCG1Q06680 1035 aa3.28□□□□□ -1.88
PKR1YMR123W AIM41Q12032 185 aa3.28□□□□□ -1.88
PKR1YMR123W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
PKR1YMR123W TUF1P02992 437 aaKnown RBP3.27□□□□□ -1.89
PKR1YMR123W HMG2P12684 1045 aa3.27□□□□□ -1.89
PKR1YMR123W CNE1P27825 502 aa3.27□□□□□ -1.89
PKR1YMR123W CAP1P28495 268 aaKnown RBP3.27□□□□□ -1.89
PKR1YMR123W HXT4P32467 576 aa3.27□□□□□ -1.89
PKR1YMR123W BRN1P38170 754 aa3.27□□□□□ -1.89
PKR1YMR123W RIM4P38741 713 aa3.27□□□□□ -1.89
PKR1YMR123W YEL025CP39991 1188 aa3.27□□□□□ -1.89
PKR1YMR123W GPP2P40106 250 aaKnown RBP3.27□□□□□ -1.89
PKR1YMR123W LRO1P40345 661 aa3.27□□□□□ -1.89
PKR1YMR123W RPS15Q01855 142 aaKnown RBP3.27□□□□□ -1.89
PKR1YMR123W SKY1Q03656 742 aa3.27□□□□□ -1.89
PKR1YMR123W RIM13Q03792 727 aa3.27□□□□□ -1.89
PKR1YMR123W YDL073WQ07454 984 aa3.27□□□□□ -1.89
PKR1YMR123W ZPS1Q12512 249 aa3.27□□□□□ -1.89
PKR1YMR123W PGK1P00560 416 aaKnown RBP3.26□□□□□ -1.89
PKR1YMR123W PMA2P19657 947 aa3.26□□□□□ -1.89
PKR1YMR123W COQ6P53318 479 aa3.26□□□□□ -1.89
PKR1YMR123W BUD17P53727 317 aa3.26□□□□□ -1.89
PKR1YMR123W ARR3Q06598 404 aa3.26□□□□□ -1.89
PKR1YMR123W YPL216WQ08964 1102 aa3.26□□□□□ -1.89
PKR1YMR123W RMP1Q12530 201 aa3.26□□□□□ -1.89
PKR1YMR123W CPA2P03965 1118 aaKnown RBP3.25□□□□□ -1.89
PKR1YMR123W RPL7AP05737 244 aaKnown RBP3.25□□□□□ -1.89
PKR1YMR123W ERG11P10614 530 aa3.25□□□□□ -1.89
PKR1YMR123W ATP12P22135 325 aa3.25□□□□□ -1.89
PKR1YMR123W AAD3P25612 363 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms