RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C RPS9BP05755 195 aaKnown RBP3.95□□□□□ -1.78
VPS33YLR396C PRP28P23394 588 aa3.95□□□□□ -1.78
VPS33YLR396C IRC5P43610 853 aa3.95□□□□□ -1.78
VPS33YLR396C DAS1P47005 663 aa3.95□□□□□ -1.78
VPS33YLR396C YAP1802P53309 568 aa3.95□□□□□ -1.78
VPS33YLR396C MUK1Q02866 612 aa3.95□□□□□ -1.78
VPS33YLR396C YMR206WQ03695 313 aa3.95□□□□□ -1.78
VPS33YLR396C YFT2Q06676 274 aa3.95□□□□□ -1.78
VPS33YLR396C SLX4Q12098 748 aa3.95□□□□□ -1.78
VPS33YLR396C DGR2P32330 852 aa3.94□□□□□ -1.78
VPS33YLR396C MTC7P32633 139 aa3.94□□□□□ -1.78
VPS33YLR396C COS111P38308 924 aa3.94□□□□□ -1.78
VPS33YLR396C YHL017WP38745 532 aa3.94□□□□□ -1.78
VPS33YLR396C PIG2P40187 538 aa3.94□□□□□ -1.78
VPS33YLR396C YIL077CP40508 320 aa3.94□□□□□ -1.78
VPS33YLR396C RFX1P48743 811 aa3.94□□□□□ -1.78
VPS33YLR396C SPO1P53541 631 aa3.94□□□□□ -1.78
VPS33YLR396C CHS5Q12114 671 aaKnown RBP3.94□□□□□ -1.78
VPS33YLR396C CLF1Q12309 687 aaPredicted RBP3.94□□□□□ -1.78
VPS33YLR396C SEC15P22224 910 aa3.94□□□□□ -1.78
VPS33YLR396C MSS1P32559 526 aaPredicted RBP3.94□□□□□ -1.78
VPS33YLR396C CDS1P38221 457 aa3.94□□□□□ -1.78
VPS33YLR396C PEA2P40091 420 aa3.94□□□□□ -1.78
VPS33YLR396C EAF7P53911 425 aaKnown RBP3.94□□□□□ -1.78
VPS33YLR396C CTF4Q01454 927 aa3.94□□□□□ -1.78
VPS33YLR396C TOP2P06786 1428 aaKnown RBP3.94□□□□□ -1.78
VPS33YLR396C MYO4P32492 1471 aa3.94□□□□□ -1.78
VPS33YLR396C THR1P17423 357 aaKnown RBP3.93□□□□□ -1.78
VPS33YLR396C EAF5P39995 279 aa3.93□□□□□ -1.78
VPS33YLR396C PRM2P40534 656 aa3.93□□□□□ -1.78
VPS33YLR396C MTD1Q02046 320 aaKnown RBP3.93□□□□□ -1.78
VPS33YLR396C YOL057WQ08225 711 aa3.93□□□□□ -1.78
VPS33YLR396C CWC2Q12046 339 aaPredicted RBP3.93□□□□□ -1.78
VPS33YLR396C ACF2Q12168 779 aa3.93□□□□□ -1.78
VPS33YLR396C MPD2Q99316 277 aa3.93□□□□□ -1.78
VPS33YLR396C YCF1P39109 1515 aaKnown RBP3.93□□□□□ -1.78
VPS33YLR396C YEL076C-AP0CX16 216 aa3.93□□□□□ -1.78
VPS33YLR396C YLR464WP0CX17 216 aa3.93□□□□□ -1.78
VPS33YLR396C YHR033WP38690 423 aa3.93□□□□□ -1.78
VPS33YLR396C CRG1P38892 291 aaRIP-Chip data3.93□□□□□ -1.78not detected
VPS33YLR396C YEL076CP39971 216 aa3.93□□□□□ -1.78
VPS33YLR396C YJR008WP47085 338 aa3.93□□□□□ -1.78
VPS33YLR396C STB4P50104 949 aa3.93□□□□□ -1.78
VPS33YLR396C SSL2Q00578 843 aa3.93□□□□□ -1.78
VPS33YLR396C PNS1Q12412 539 aa3.93□□□□□ -1.78
VPS33YLR396C SMC4Q12267 1418 aa3.93□□□□□ -1.78
VPS33YLR396C MOH1P38191 138 aa3.92□□□□□ -1.78
VPS33YLR396C PCL5P38794 229 aa3.92□□□□□ -1.78
VPS33YLR396C FUN12P39730 1002 aaKnown RBP3.92□□□□□ -1.78
VPS33YLR396C FTR1P40088 404 aa3.92□□□□□ -1.78
VPS33YLR396C MPS3P47069 682 aa3.92□□□□□ -1.78
VPS33YLR396C SMX3P54999 86 aaPredicted RBP3.92□□□□□ -1.78
VPS33YLR396C DNA2P38859 1522 aa3.92□□□□□ -1.78
VPS33YLR396C SNQ2P32568 1501 aaKnown RBP3.91□□□□□ -1.78
VPS33YLR396C KHA1P40309 873 aa3.91□□□□□ -1.78
VPS33YLR396C YDL183CP48569 320 aa3.91□□□□□ -1.78
VPS33YLR396C HOL1P53389 586 aa3.91□□□□□ -1.78
VPS33YLR396C FDC1Q03034 503 aa3.91□□□□□ -1.78
VPS33YLR396C HLR1Q04429 423 aa3.91□□□□□ -1.78
VPS33YLR396C YOR378WQ08902 515 aa3.91□□□□□ -1.78
VPS33YLR396C USV1Q12132 391 aa3.91□□□□□ -1.78
VPS33YLR396C YOR1P53049 1477 aa3.91□□□□□ -1.78
VPS33YLR396C TSC11P40061 1430 aa3.91□□□□□ -1.78
VPS33YLR396C HMG2P12684 1045 aa3.91□□□□□ -1.78
VPS33YLR396C TUP1P16649 713 aa3.91□□□□□ -1.78
VPS33YLR396C OAR1P35731 278 aa3.91□□□□□ -1.78
VPS33YLR396C SET3P36124 751 aa3.91□□□□□ -1.78
VPS33YLR396C CTP1P38152 299 aa3.91□□□□□ -1.78
VPS33YLR396C UBS1P38290 277 aa3.91□□□□□ -1.78
VPS33YLR396C PEF1P53238 335 aa3.91□□□□□ -1.78
VPS33YLR396C CNM67P53865 581 aaKnown RBP3.91□□□□□ -1.78
VPS33YLR396C MCH5Q08777 521 aa3.91□□□□□ -1.78
VPS33YLR396C SST2P11972 698 aaKnown RBP3.9□□□□□ -1.78
VPS33YLR396C NIC96P34077 839 aa3.9□□□□□ -1.78
VPS33YLR396C RMA1P36001 430 aaKnown RBP3.9□□□□□ -1.78
VPS33YLR396C STL1P39932 569 aa3.9□□□□□ -1.78
VPS33YLR396C MNT2P53059 558 aa3.9□□□□□ -1.78
VPS33YLR396C ATG4P53867 494 aa3.9□□□□□ -1.78
VPS33YLR396C TIM44Q01852 431 aa3.9□□□□□ -1.78
VPS33YLR396C YCG1Q06680 1035 aa3.9□□□□□ -1.78
VPS33YLR396C HBT1Q07653 1046 aaKnown RBP3.9□□□□□ -1.78
VPS33YLR396C VPS5Q92331 675 aa3.9□□□□□ -1.78
VPS33YLR396C KOG1P38873 1557 aa3.9□□□□□ -1.79
VPS33YLR396C ATP4P05626 244 aa3.9□□□□□ -1.79
VPS33YLR396C NTH1P32356 751 aa3.9□□□□□ -1.79
VPS33YLR396C CBR1P38626 284 aaKnown RBP3.9□□□□□ -1.79
VPS33YLR396C SDS3P40505 327 aa3.9□□□□□ -1.79
VPS33YLR396C ATG36P46983 293 aa3.9□□□□□ -1.79
VPS33YLR396C TIM50Q02776 476 aa3.9□□□□□ -1.79
VPS33YLR396C IZH3Q07959 543 aa3.9□□□□□ -1.79
VPS33YLR396C SWR1Q05471 1514 aa3.89□□□□□ -1.79
VPS33YLR396C GEA1P47102 1408 aaPredicted RBP3.89□□□□□ -1.79
VPS33YLR396C RKR1Q04781 1562 aa3.89□□□□□ -1.79
VPS33YLR396C HOP1P20050 605 aa3.89□□□□□ -1.79
VPS33YLR396C FUB1P25659 250 aa3.89□□□□□ -1.79
VPS33YLR396C YHR097CP38809 366 aaKnown RBP3.89□□□□□ -1.79
VPS33YLR396C TMN3P40071 706 aa3.89□□□□□ -1.79
VPS33YLR396C NDC80P40460 691 aa3.89□□□□□ -1.79
VPS33YLR396C YIL092WP40497 633 aa3.89□□□□□ -1.79
VPS33YLR396C MAD2P40958 196 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms