RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W HXT7P39004 570 aa2.72□□□□□ -1.97
HRD3YLR207W YIL092WP40497 633 aa2.72□□□□□ -1.97
HRD3YLR207W RPN11P43588 306 aaKnown RBP2.72□□□□□ -1.97
HRD3YLR207W SGM1P47166 707 aa2.72□□□□□ -1.97
HRD3YLR207W YLR287CQ05881 355 aa2.72□□□□□ -1.97
HRD3YLR207W IMH1Q06704 911 aaKnown RBP2.72□□□□□ -1.97
HRD3YLR207W PSK2Q08217 1101 aa2.72□□□□□ -1.97
HRD3YLR207W SLM3Q12093 417 aa2.72□□□□□ -1.97
HRD3YLR207W TAH18Q12181 623 aa2.72□□□□□ -1.97
HRD3YLR207W HSH49Q99181 213 aaPredicted RBP2.72□□□□□ -1.97
HRD3YLR207W MHP1P43638 1398 aa2.72□□□□□ -1.97
HRD3YLR207W SED4P25365 1065 aa2.71□□□□□ -1.98
HRD3YLR207W HSP104P31539 908 aaKnown RBP2.71□□□□□ -1.98
HRD3YLR207W KAE1P36132 386 aa2.71□□□□□ -1.98
HRD3YLR207W APT2P36973 181 aa2.71□□□□□ -1.98
HRD3YLR207W APN2P38207 520 aa2.71□□□□□ -1.98
HRD3YLR207W YHR078WP38799 552 aa2.71□□□□□ -1.98
HRD3YLR207W SAK1P38990 1142 aa2.71□□□□□ -1.98
HRD3YLR207W YEL068CP39977 110 aa2.71□□□□□ -1.98
HRD3YLR207W DOT5P40553 215 aa2.71□□□□□ -1.98
HRD3YLR207W CEG1Q01159 459 aaPredicted RBP2.71□□□□□ -1.98
HRD3YLR207W EIS1Q05050 843 aaKnown RBP2.71□□□□□ -1.98
HRD3YLR207W SPN1Q06505 410 aaPredicted RBP2.71□□□□□ -1.98
HRD3YLR207W CDA1Q06702 301 aa2.71□□□□□ -1.98
HRD3YLR207W RRG1Q12167 365 aaPredicted RBP2.71□□□□□ -1.98
HRD3YLR207W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
HRD3YLR207W SPE1P08432 466 aa2.71□□□□□ -1.98
HRD3YLR207W HOP1P20050 605 aa2.71□□□□□ -1.98
HRD3YLR207W PHO3P24031 467 aa2.71□□□□□ -1.98
HRD3YLR207W XRS2P33301 854 aa2.71□□□□□ -1.98
HRD3YLR207W MUD2P36084 527 aaKnown RBP2.71□□□□□ -1.98
HRD3YLR207W APM3P38153 483 aa2.71□□□□□ -1.98
HRD3YLR207W BCD1P38772 366 aa2.71□□□□□ -1.98
HRD3YLR207W YHR202WP38887 602 aa2.71□□□□□ -1.98
HRD3YLR207W UME6P39001 836 aa2.71□□□□□ -1.98
HRD3YLR207W GPD2P41911 440 aaKnown RBP2.71□□□□□ -1.98
HRD3YLR207W YJR039WP47107 1121 aa2.71□□□□□ -1.98
HRD3YLR207W RRP46P53256 223 aaPredicted RBP2.71□□□□□ -1.98
HRD3YLR207W MRPL19P53875 158 aa2.71□□□□□ -1.98
HRD3YLR207W MOT3P54785 490 aaKnown RBP2.71□□□□□ -1.98
HRD3YLR207W MRPL13Q02204 264 aa2.71□□□□□ -1.98
HRD3YLR207W SIZ1Q04195 904 aa2.71□□□□□ -1.98
HRD3YLR207W YCG1Q06680 1035 aa2.71□□□□□ -1.98
HRD3YLR207W CWC2Q12046 339 aaPredicted RBP2.71□□□□□ -1.98
HRD3YLR207W DCS2Q12123 353 aa2.71□□□□□ -1.98
HRD3YLR207W PSK1P31374 1356 aa2.71□□□□□ -1.98
HRD3YLR207W ADE6P38972 1358 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W GFA1P14742 717 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W PFK2P16862 959 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
HRD3YLR207W CMK1P27466 446 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W VPH1P32563 840 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W SHM2P37291 469 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W VID28P40547 921 aa2.7□□□□□ -1.98
HRD3YLR207W SAP4P53036 818 aa2.7□□□□□ -1.98
HRD3YLR207W GSF2Q04697 403 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W SDH5Q08230 162 aa2.7□□□□□ -1.98
HRD3YLR207W SGO1Q08490 590 aa2.7□□□□□ -1.98
HRD3YLR207W ARP7Q12406 477 aa2.7□□□□□ -1.98
HRD3YLR207W YPR053CQ6Q5F3 151 aa2.7□□□□□ -1.98
HRD3YLR207W SWI6P09959 803 aa2.7□□□□□ -1.98
HRD3YLR207W AAC3P18238 307 aa2.7□□□□□ -1.98
HRD3YLR207W ABZ1P37254 787 aaPredicted RBP2.7□□□□□ -1.98
HRD3YLR207W FAT1P38225 669 aa2.7□□□□□ -1.98
HRD3YLR207W SRP68P38687 599 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W SSZ1P38788 538 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W VHR1P40522 640 aa2.7□□□□□ -1.98
HRD3YLR207W MND2P40577 368 aa2.7□□□□□ -1.98
HRD3YLR207W RPS0BP46654 252 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W SET2P46995 733 aaKnown RBP2.7□□□□□ -1.98
HRD3YLR207W LYS4P49367 693 aaPredicted RBP2.7□□□□□ -1.98
HRD3YLR207W EXG2P52911 562 aa2.7□□□□□ -1.98
HRD3YLR207W YGR130CP53278 816 aa2.7□□□□□ -1.98
HRD3YLR207W NOP15P53927 220 aaPredicted RBP2.7□□□□□ -1.98
HRD3YLR207W PKH1Q03407 766 aa2.7□□□□□ -1.98
HRD3YLR207W HLR1Q04429 423 aa2.7□□□□□ -1.98
HRD3YLR207W SGD1Q06132 899 aa2.7□□□□□ -1.98
HRD3YLR207W OMS1Q06668 471 aa2.7□□□□□ -1.98
HRD3YLR207W MCH5Q08777 521 aa2.7□□□□□ -1.98
HRD3YLR207W PSF3Q12146 194 aa2.7□□□□□ -1.98
HRD3YLR207W YDR215CQ12240 137 aa2.7□□□□□ -1.98
HRD3YLR207W PHM7Q12252 991 aa2.7□□□□□ -1.98
HRD3YLR207W SWM1Q12379 170 aa2.7□□□□□ -1.98
HRD3YLR207W TY1B-NL2Q99337 1749 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W AUS1Q08409 1394 aa2.69□□□□□ -1.98
HRD3YLR207W MLP1Q02455 1875 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W CYC1P00044 109 aaPredicted RBP2.69□□□□□ -1.98
HRD3YLR207W RPS17AP02407 136 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W GLN4P13188 809 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W RPS17BP14127 136 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W PAH1P32567 862 aa2.69□□□□□ -1.98
HRD3YLR207W SAS3P34218 831 aa2.69□□□□□ -1.98
HRD3YLR207W LRG1P35688 1017 aa2.69□□□□□ -1.98
HRD3YLR207W SRP72P38688 640 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W MIP6P38760 659 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W APE4P38821 490 aa2.69□□□□□ -1.98
HRD3YLR207W SLN1P39928 1220 aaPredicted RBP2.69□□□□□ -1.98
HRD3YLR207W STL1P39932 569 aa2.69□□□□□ -1.98
HRD3YLR207W NOP16P40007 231 aaKnown RBP2.69□□□□□ -1.98
HRD3YLR207W RTR1P40084 226 aaPredicted RBP2.69□□□□□ -1.98
HRD3YLR207W PSF2P40359 213 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms