RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	YML131W	Q03102	365 aa		2.45	□□□□□ -2.02
RIC1	YLR039C	ATG11	Q12527	1178 aa		2.45	□□□□□ -2.02
RIC1	YLR039C	TY1B-DR4	Q07793	1604 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	NCP1	P16603	691 aa	Known RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	MSM1	P22438	575 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	SWI4	P25302	1093 aa	Known RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	FEN2	P25621	512 aa	Known RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	MSH1	P25846	959 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	MSS1	P32559	526 aa	Predicted RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	COS111	P38308	924 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	STT3	P39007	718 aa	Known RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	SAP185	P40856	1058 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	YCG1	Q06680	1035 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	ENB1	Q08299	606 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	GFA1	P14742	717 aa	Known RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	MVD1	P32377	396 aa	Known RBP	2.44	□□□□□ -2.02
RIC1	YLR039C	STB5	P38699	743 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	ELO3	P40319	345 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	YIR042C	P40586	236 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	BNA1	P47096	177 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	GTR1	Q00582	310 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	YFT2	Q06676	274 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	VPS5	Q92331	675 aa		2.44	□□□□□ -2.02
RIC1	YLR039C	PHO81	P17442	1178 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	RPA135	P22138	1203 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	DCG1	P32460	244 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	SFB3	P38810	929 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	PAN2	P53010	1115 aa	Predicted RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	PRP43	P53131	767 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	CPR6	P53691	371 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	TRS130	Q03660	1102 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	CAF20	P12962	161 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	KIN82	P25341	720 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	PTH2	P34222	208 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	YBR138C	P38277	524 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	PUG1	P40100	303 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	YJL163C	P46996	555 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	AVT1	P47082	602 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	ENP2	P48234	707 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	MNN10	P50108	393 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	UBC11	P52492	156 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	SQS1	P53866	767 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	DLT1	Q04216	342 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	SSP2	Q08646	371 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	MLH3	Q12083	715 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	CWH43	P25618	953 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	SDS22	P36047	338 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	CCT3	P39077	534 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	TMN3	P40071	706 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	TAH11	P47112	604 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	RRT6	P53117	311 aa	Predicted RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	VPS72	Q03388	795 aa		2.43	□□□□□ -2.02
RIC1	YLR039C	EIS1	Q05050	843 aa	Known RBP	2.43	□□□□□ -2.02
RIC1	YLR039C	YLR358C	O13565	187 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	PMA1	P05030	918 aa	Known RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	STE11	P23561	717 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	MCM3	P24279	971 aa	Known RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	YCR015C	P25616	317 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	SET3	P36124	751 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	SPO1	P53541	631 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	YLR040C	Q07988	224 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	FRE5	Q08908	694 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	ICL2	Q12031	575 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	NKP1	Q12493	238 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	ADE3	P07245	946 aa	Known RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	POL3	P15436	1097 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	ERG4	P25340	473 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	HIS7	P33734	552 aa	Known RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	PHO11	P35842	467 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	IFA38	P38286	347 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	PHO12	P38693	467 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	AMA1	P50082	593 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	MDR1	P53258	950 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	CLU1	Q03690	1277 aa	Known RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	PPN1	Q04119	674 aa		2.42	□□□□□ -2.02
RIC1	YLR039C	DIA2	Q08496	732 aa	Predicted RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	CHS5	Q12114	671 aa	Known RBP	2.42	□□□□□ -2.02
RIC1	YLR039C	PCK1	P10963	549 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	PRP22	P24384	1145 aa	Known RBP	2.41	□□□□□ -2.02
RIC1	YLR039C	FRD1	P32614	470 aa	Known RBP	2.41	□□□□□ -2.02
RIC1	YLR039C	YHR097C	P38809	366 aa	Known RBP	2.41	□□□□□ -2.02
RIC1	YLR039C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.41	□□□□□ -2.02	not detected
RIC1	YLR039C	GSM1	P42950	618 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	POL31	P46957	487 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	MPS3	P47069	682 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	UBA2	P52488	636 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	PAP2	P53632	584 aa	Known RBP	2.41	□□□□□ -2.02
RIC1	YLR039C	TFC6	Q06339	672 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	ARR3	Q06598	404 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	HOS1	Q12214	470 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	ZRT2	Q12436	422 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	PHO5	P00635	467 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	MET3	P08536	511 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	EFT1	P32324	842 aa	Known RBP	2.41	□□□□□ -2.02
RIC1	YLR039C	VPS27	P40343	622 aa	Known RBP	2.41	□□□□□ -2.02
RIC1	YLR039C	BLS1	Q06071	122 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	PSR2	Q07949	397 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	SIR1	P21691	654 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	SEC15	P22224	910 aa		2.41	□□□□□ -2.02
RIC1	YLR039C	HRR25	P29295	494 aa	Known RBP	2.41	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 99.1 ms