RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNU114	YKL173W	IMA5	P40884	581 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	PFA3	P42836	336 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	MAD3	P47074	515 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	ZIP2	P53061	704 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	YAP1802	P53309	568 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	HMO1	Q03973	246 aa	Known RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	CRR1	Q05790	422 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	YLR407W	Q06070	228 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	YPS7	Q06325	596 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	HIM1	Q06674	414 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	MED1	Q12321	566 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	CDC31	P06704	161 aa	Known RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	PPR1	P07272	904 aa	Predicted RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	MET8	P15807	274 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	MUD2	P36084	527 aa	Known RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	AKL1	P38080	1108 aa	Known RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	DOT6	P40059	670 aa	Known RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	VID28	P40547	921 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	ASK10	P48361	1146 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	PCL10	P53124	433 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	NGL1	Q08213	363 aa	Known RBP	2.69	□□□□□ -1.98
SNU114	YKL173W	NUR1	Q12066	484 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	DIN7	Q12086	430 aa		2.69	□□□□□ -1.98
SNU114	YKL173W	SAN1	P22470	610 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	CHS3	P29465	1165 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	PUG1	P40100	303 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	YIL092W	P40497	633 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	AIM39	Q08223	395 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	YLR415C	O13578	112 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	PSY4	P38193	441 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	ECM1	P39715	212 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	DPH1	P40487	425 aa	Known RBP	2.68	□□□□□ -1.98
SNU114	YKL173W	SSY5	P47002	699 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	PTA1	Q01329	785 aa	Predicted RBP	2.68	□□□□□ -1.98
SNU114	YKL173W	MTD1	Q02046	320 aa	Known RBP	2.68	□□□□□ -1.98
SNU114	YKL173W	RNT1	Q02555	471 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	ADY4	Q05955	493 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	STP4	Q07351	490 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	MTF2	P10849	440 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	DAL5	P15365	543 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	HCA4	P20448	770 aa	Known RBP	2.68	□□□□□ -1.98
SNU114	YKL173W	PHO3	P24031	467 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	YPT7	P32939	208 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	OAR1	P35731	278 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	IFA38	P38286	347 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	UBS1	P38290	277 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	MIP6	P38760	659 aa	Known RBP	2.68	□□□□□ -1.98
SNU114	YKL173W	SET5	P38890	526 aa	Known RBP	2.68	□□□□□ -1.98
SNU114	YKL173W	AXL2	P38928	823 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	SWD1	P39706	426 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	ARA2	Q04212	335 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	YKU80	Q04437	629 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	SWM1	Q12379	170 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	ARP7	Q12406	477 aa		2.68	□□□□□ -1.98
SNU114	YKL173W	DIF1	O13577	133 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	RPS0A	P32905	252 aa	Known RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	RRN3	P36070	627 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	SET3	P36124	751 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	SRP68	P38687	599 aa	Known RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	ELO3	P40319	345 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	TAD3	Q9URQ3	322 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	ALG7	P07286	448 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	GUK1	P15454	187 aa	Known RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	AAC3	P18238	307 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	GFD2	P25370	566 aa	Known RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	MTC7	P32633	139 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	APL2	P36000	726 aa	Predicted RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	CAB3	P36076	571 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	STT3	P39007	718 aa	Known RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	SCS2	P40075	244 aa	Known RBP	2.67	□□□□□ -1.98
SNU114	YKL173W	TRM3	Q07527	1436 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	DOP1	Q03921	1698 aa		2.67	□□□□□ -1.98
SNU114	YKL173W	YCL049C	P25577	312 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	IMG2	P25642	146 aa	Predicted RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	CBF2	P32504	956 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	STL1	P39932	569 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	MNT2	P53059	558 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YNR071C	P53757	342 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YEL076C-A	P0CX16	216 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YLR464W	P0CX17	216 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	DHR2	P36009	735 aa	Predicted RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	APM3	P38153	483 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YBR138C	P38277	524 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	SAK1	P38990	1142 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YEL076C	P39971	216 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	TPA1	P40032	644 aa	Known RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	SHR5	P41912	237 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YJL163C	P46996	555 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	RNR4	P49723	345 aa	Known RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	AMA1	P50082	593 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	YGR250C	P53316	781 aa	Known RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	ARE2	P53629	642 aa	Known RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	TAF11	Q04226	346 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	BLS1	Q06071	122 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	OPY2	Q06810	360 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	FRE5	Q08908	694 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	TGL5	Q12043	749 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	PGA3	Q12746	312 aa	Known RBP	2.66	□□□□□ -1.98
SNU114	YKL173W	PRC1	P00729	532 aa		2.66	□□□□□ -1.98
SNU114	YKL173W	INH1	P01097	85 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 101.4 ms