RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W ARP6Q12509 438 aa5.87□□□□□ -1.47
CBF1YJR060W RPL11BQ3E757 174 aaPredicted RBP5.87□□□□□ -1.47
CBF1YJR060W DFG16Q99234 619 aa5.87□□□□□ -1.47
CBF1YJR060W UBR2Q07963 1872 aa5.86□□□□□ -1.47
CBF1YJR060W VPS1P21576 704 aaKnown RBP5.86□□□□□ -1.47
CBF1YJR060W MCM3P24279 971 aaKnown RBP5.86□□□□□ -1.47
CBF1YJR060W LRG1P35688 1017 aa5.86□□□□□ -1.47
CBF1YJR060W NOC2P39744 710 aaKnown RBP5.86□□□□□ -1.47
CBF1YJR060W HYR1P40581 163 aaKnown RBP5.86□□□□□ -1.47
CBF1YJR060W UBP6P43593 499 aaKnown RBP5.86□□□□□ -1.47
CBF1YJR060W GUS1P46655 708 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
CBF1YJR060W SUB1P54000 292 aaKnown RBP5.86□□□□□ -1.47
CBF1YJR060W ORC4P54791 529 aa5.86□□□□□ -1.47
CBF1YJR060W YLL058WQ12198 575 aa5.86□□□□□ -1.47
CBF1YJR060W MSD1P15179 658 aaKnown RBP5.85□□□□□ -1.47
CBF1YJR060W CKA2P19454 339 aa5.85□□□□□ -1.47
CBF1YJR060W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
CBF1YJR060W DBP2P24783 546 aaKnown RBP5.85□□□□□ -1.47
CBF1YJR060W BCS1P32839 456 aa5.85□□□□□ -1.47
CBF1YJR060W VPS24P36095 224 aaKnown RBP5.85□□□□□ -1.47
CBF1YJR060W TVP38P36164 337 aa5.85□□□□□ -1.47
CBF1YJR060W MAL33P38157 468 aa5.85□□□□□ -1.47
CBF1YJR060W GPD2P41911 440 aaKnown RBP5.85□□□□□ -1.47
CBF1YJR060W YFL040WP43562 540 aa5.85□□□□□ -1.47
CBF1YJR060W YGL039WP53183 348 aaKnown RBP5.85□□□□□ -1.47
CBF1YJR060W SDA1P53313 767 aaKnown RBP5.85□□□□□ -1.47
CBF1YJR060W HRQ1Q05549 1077 aa5.85□□□□□ -1.47
CBF1YJR060W CRD1Q07560 283 aa5.85□□□□□ -1.47
CBF1YJR060W ACM1Q08981 209 aa5.85□□□□□ -1.47
CBF1YJR060W YPR071WQ12346 211 aa5.85□□□□□ -1.47
CBF1YJR060W SMC6Q12749 1114 aa5.85□□□□□ -1.47
CBF1YJR060W RTP1Q12751 981 aa5.85□□□□□ -1.47
CBF1YJR060W MDM12Q92328 271 aa5.85□□□□□ -1.47
CBF1YJR060W HIS4P00815 799 aaKnown RBP5.84□□□□□ -1.47
CBF1YJR060W RPL22AP05749 121 aaKnown RBP5.84□□□□□ -1.47
CBF1YJR060W MEF1P25039 761 aa5.84□□□□□ -1.47
CBF1YJR060W RDS1P25611 832 aa5.84□□□□□ -1.47
CBF1YJR060W UIP5P36137 443 aa5.84□□□□□ -1.47
CBF1YJR060W PET10P36139 283 aa5.84□□□□□ -1.47
CBF1YJR060W RFT1P38206 574 aaPredicted RBP5.84□□□□□ -1.47
CBF1YJR060W BDH2P39713 417 aa5.84□□□□□ -1.47
CBF1YJR060W AFG3P39925 761 aa5.84□□□□□ -1.47
CBF1YJR060W YEL025CP39991 1188 aa5.84□□□□□ -1.47
CBF1YJR060W SKP2P42843 763 aa5.84□□□□□ -1.47
CBF1YJR060W RPS7BP48164 190 aaKnown RBP5.84□□□□□ -1.47
CBF1YJR060W ECL1P48235 211 aa5.84□□□□□ -1.47
CBF1YJR060W CTR1P49573 406 aa5.84□□□□□ -1.47
CBF1YJR060W DAK1P54838 584 aaKnown RBP5.84□□□□□ -1.47
CBF1YJR060W FUS2Q05670 677 aa5.84□□□□□ -1.47
CBF1YJR060W PEX19Q07418 342 aa5.84□□□□□ -1.47
CBF1YJR060W THI73Q07904 523 aa5.84□□□□□ -1.47
CBF1YJR060W TMA17Q12513 150 aa5.84□□□□□ -1.47
CBF1YJR060W TUF1P02992 437 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W ADE8P04161 214 aa5.83□□□□□ -1.48
CBF1YJR060W SRD1P09007 221 aa5.83□□□□□ -1.48
CBF1YJR060W MAS2P11914 482 aa5.83□□□□□ -1.48
CBF1YJR060W TCP1P12612 559 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W CLN3P13365 580 aa5.83□□□□□ -1.48
CBF1YJR060W PRP22P24384 1145 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W VBA3P25594 458 aa5.83□□□□□ -1.48
CBF1YJR060W URA1P28272 314 aaPredicted RBP5.83□□□□□ -1.48
CBF1YJR060W RME1P32338 300 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W FLR1P38124 548 aa5.83□□□□□ -1.48
CBF1YJR060W SIT1P39980 628 aa5.83□□□□□ -1.48
CBF1YJR060W FIS1P40515 155 aa5.83□□□□□ -1.48
CBF1YJR060W SEC26P41810 973 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W CUE3P53137 624 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W CBK1P53894 756 aa5.83□□□□□ -1.48
CBF1YJR060W UME1Q03010 460 aa5.83□□□□□ -1.48
CBF1YJR060W MMR1Q06324 491 aa5.83□□□□□ -1.48
CBF1YJR060W SMC5Q08204 1093 aa5.83□□□□□ -1.48
CBF1YJR060W ETT1Q08421 412 aaKnown RBP5.83□□□□□ -1.48
CBF1YJR060W FAP7Q12055 197 aaPredicted RBP5.83□□□□□ -1.48
CBF1YJR060W VPS13Q07878 3144 aa5.82□□□□□ -1.48
CBF1YJR060W FRS2P15625 503 aaKnown RBP5.82□□□□□ -1.48
CBF1YJR060W KIN82P25341 720 aa5.82□□□□□ -1.48
CBF1YJR060W BMH1P29311 267 aaKnown RBP5.82□□□□□ -1.48
CBF1YJR060W UBP11P36026 717 aa5.82□□□□□ -1.48
CBF1YJR060W YRO2P38079 344 aa5.82□□□□□ -1.48
CBF1YJR060W SAH1P39954 449 aaKnown RBP5.82□□□□□ -1.48
CBF1YJR060W AVT1P47082 602 aa5.82□□□□□ -1.48
CBF1YJR060W PSP2P50109 593 aaKnown RBP5.82□□□□□ -1.48
CBF1YJR060W SCS3P53012 380 aa5.82□□□□□ -1.48
CBF1YJR060W PGA2P53903 129 aa5.82□□□□□ -1.48
CBF1YJR060W SRP1Q02821 542 aaKnown RBP5.82□□□□□ -1.48
CBF1YJR060W MSC2Q03455 724 aa5.82□□□□□ -1.48
CBF1YJR060W EIS1Q05050 843 aaKnown RBP5.82□□□□□ -1.48
CBF1YJR060W HEM1P09950 548 aaPredicted RBP5.81□□□□□ -1.48
CBF1YJR060W RPC53P25441 422 aa5.81□□□□□ -1.48
CBF1YJR060W SEG2P34250 1132 aa5.81□□□□□ -1.48
CBF1YJR060W SIP3P38717 1229 aa5.81□□□□□ -1.48
CBF1YJR060W UBA2P52488 636 aa5.81□□□□□ -1.48
CBF1YJR060W SEC5P89102 971 aa5.81□□□□□ -1.48
CBF1YJR060W VPS72Q03388 795 aa5.81□□□□□ -1.48
CBF1YJR060W LCD1Q04377 747 aa5.81□□□□□ -1.48
CBF1YJR060W COG8Q04632 607 aa5.81□□□□□ -1.48
CBF1YJR060W HFI1Q12060 488 aa5.81□□□□□ -1.48
CBF1YJR060W SVS1Q12254 260 aa5.81□□□□□ -1.48
CBF1YJR060W HIF1Q12373 385 aa5.81□□□□□ -1.48
CBF1YJR060W ATG11Q12527 1178 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms