RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	COS7	Q07788	383 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	CDC19	P00549	500 aa	Known RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	OCT1	P35999	772 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	MYO3	P36006	1272 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	OTU2	P38747	307 aa	Known RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	SLX8	P40072	274 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	JEM1	P40358	645 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	CAB2	P40506	365 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	SND1	Q04007	877 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	RPN5	Q12250	445 aa	Known RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	LSO1	Q3E827	93 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	LAG2	Q92325	660 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	KIP1	P28742	1111 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	URA10	P30402	227 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	VPH2	P32341	215 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	PCF11	P39081	626 aa	Predicted RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	MGS1	P40151	587 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	DIM1	P41819	318 aa	Known RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	AIM23	P47015	356 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	TMA22	P47089	198 aa	Predicted RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	AZR1	P50080	613 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	BIO4	P53630	237 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	REX2	P54964	269 aa	Known RBP	4.81	□□□□□ -1.64
PAN1	YIR006C	HFI1	Q12060	488 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	SLP1	Q12232	587 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	YVC1	Q12324	675 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	HRT3	Q12347	344 aa		4.81	□□□□□ -1.64
PAN1	YIR006C	HIS1	P00498	297 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	KIP2	P28743	706 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	ROK1	P45818	564 aa	Predicted RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	CUS2	P53830	285 aa	Predicted RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	RLI1	Q03195	608 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	TUB3	P09734	445 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	MSS116	P15424	664 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	TRX1	P22217	103 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	RVS161	P25343	265 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	RAD16	P31244	790 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	PEP12	P32854	288 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	KDX1	P36005	433 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	PCA1	P38360	1216 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	EMC2	P47133	292 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	YGR153W	P48238	217 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	MON1	P53129	644 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	NAT1	P12945	854 aa	Known RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	BAS1	P22035	811 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	YCR051W	P25631	222 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	ABD1	P32783	436 aa	Predicted RBP	4.8	□□□□□ -1.64
PAN1	YIR006C	CSG2	P35206	410 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	YBL086C	P38177	466 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	STN1	P38960	494 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	YJL107C	P42947	387 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	YLL056C	Q12177	298 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	REC8	Q12188	680 aa		4.8	□□□□□ -1.64
PAN1	YIR006C	GCR1	P07261	785 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	SAM1	P10659	382 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	PRP9	P19736	530 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	HES1	P35843	434 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	CUE2	P36075	443 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	YBR138C	P38277	524 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	UBP7	P40453	1071 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
PAN1	YIR006C	DOT1	Q04089	582 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	MUS81	Q04149	632 aa	Predicted RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	NHA1	Q99271	985 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	GAL10	P04397	699 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	GCN3	P14741	305 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	ERG7	P38604	731 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	SMX2	P40204	77 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	ALA1	P40825	983 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	FMP33	P46998	180 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	YGL108C	P53139	140 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	GPI1	P53306	609 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	YNL010W	P53981	241 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	RSC4	Q02206	625 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	ERO1	Q03103	563 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	YML037C	Q03703	340 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	ARO80	Q04052	950 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	VTA1	Q06263	330 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	GCD1	P09032	578 aa	Predicted RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	YKL100C	P34248	587 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	SET5	P38890	526 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	ATP22	P50273	684 aa	Predicted RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	RTT102	P53330	157 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	ARC35	P53731	342 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	YNL260C	P53846	198 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	FIN1	Q03898	291 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	KRE28	Q04431	385 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	HDA3	Q06623	655 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	HEM2	P05373	342 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	WHI2	P12611	486 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	TRK2	P28584	889 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	HSP78	P33416	811 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	RCK2	P38623	610 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	YIL054W	P40524	105 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	ARC1	P46672	376 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	RPS12	P48589	143 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	YNR063W	P53749	607 aa		4.79	□□□□□ -1.64
PAN1	YIR006C	YNL134C	P53912	376 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	MTD1	Q02046	320 aa	Known RBP	4.79	□□□□□ -1.64
PAN1	YIR006C	SPE4	Q12455	300 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms