RNA–Protein interactions for RNA: YFR046C

CNN1, Transcript of Kinetochore protein, yeast

Gene CNN1, Length 1,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNN1	YFR046C	MRPS35	P53292	345 aa		4.57	□□□□□ -1.68
CNN1	YFR046C	LGE1	Q02796	332 aa	Known RBP	4.57	□□□□□ -1.68
CNN1	YFR046C	SWM1	Q12379	170 aa		4.57	□□□□□ -1.68
CNN1	YFR046C	RIF1	P29539	1916 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	OPI1	P21957	404 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	TKL1	P23254	680 aa	Known RBP	4.56	□□□□□ -1.68
CNN1	YFR046C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
CNN1	YFR046C	RPD3	P32561	433 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	JHD1	P40034	492 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	RSC8	P43609	557 aa	Known RBP	4.56	□□□□□ -1.68
CNN1	YFR046C	FOL1	P53848	824 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	ERG5	P54781	538 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	RPS15	Q01855	142 aa	Known RBP	4.56	□□□□□ -1.68
CNN1	YFR046C	BRE1	Q07457	700 aa	Known RBP	4.56	□□□□□ -1.68
CNN1	YFR046C	GUD1	Q07729	489 aa		4.56	□□□□□ -1.68
CNN1	YFR046C	RPS9A	O13516	197 aa	Known RBP	4.55	□□□□□ -1.68
CNN1	YFR046C	NUC1	P08466	329 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	RIT1	P23796	513 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	SEC21	P32074	935 aa	Known RBP	4.55	□□□□□ -1.68
CNN1	YFR046C	TYE7	P33122	291 aa	Predicted RBP	4.55	□□□□□ -1.68
CNN1	YFR046C	REG2	P38232	338 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	VPS45	P38932	577 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	SIT1	P39980	628 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	SDP1	P40479	209 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	GND2	P53319	492 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	SLU7	Q02775	382 aa	Known RBP	4.55	□□□□□ -1.68
CNN1	YFR046C	MUK1	Q02866	612 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	VPS72	Q03388	795 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	LCD1	Q04377	747 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	TDA5	Q06417	326 aa	Known RBP	4.55	□□□□□ -1.68
CNN1	YFR046C	SUE1	Q06524	206 aa		4.55	□□□□□ -1.68
CNN1	YFR046C	FKS1	P38631	1876 aa	Known RBP	4.55	□□□□□ -1.68
CNN1	YFR046C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
CNN1	YFR046C	MET3	P08536	511 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	CDC16	P09798	840 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	SNA3	P14359	133 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	ANP1	P32629	500 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	AFR1	P33304	620 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	SPC42	P36094	363 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	SGM1	P47166	707 aa		4.54	□□□□□ -1.68
CNN1	YFR046C	TY1B-A	O13527	1196 aa	Known RBP	4.53	□□□□□ -1.68
CNN1	YFR046C	MAS2	P11914	482 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	RPL8B	P29453	256 aa	Known RBP	4.53	□□□□□ -1.68
CNN1	YFR046C	CDC11	P32458	415 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	REC104	P33323	182 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	NDT80	P38830	627 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	CTR1	P49573	406 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	AZR1	P50080	613 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	LIF1	P53150	421 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	PUS2	P53167	370 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	PTA1	Q01329	785 aa	Predicted RBP	4.53	□□□□□ -1.68
CNN1	YFR046C	RPT6	Q01939	405 aa	Known RBP	4.53	□□□□□ -1.68
CNN1	YFR046C	YKR011C	Q02209	353 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	DLT1	Q04216	342 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	CLF1	Q12309	687 aa	Predicted RBP	4.53	□□□□□ -1.68
CNN1	YFR046C	NDJ1	Q12366	352 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	TRM13	Q12383	476 aa		4.53	□□□□□ -1.68
CNN1	YFR046C	SRP54	P20424	541 aa	Known RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	CTF13	P35203	478 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	YBR184W	P38299	523 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	RFC1	P38630	861 aa	Known RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	SPF1	P39986	1215 aa	Known RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	TOK1	P40310	691 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	RPS7B	P48164	190 aa	Known RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	FMS1	P50264	508 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	LSB1	P53281	241 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	HDA1	P53973	706 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	MYO5	Q04439	1219 aa	Known RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	HBT1	Q07653	1046 aa	Known RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	FRE5	Q08908	694 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	DAP1	Q12091	152 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	SSF2	Q12153	453 aa	Predicted RBP	4.52	□□□□□ -1.69
CNN1	YFR046C	ATG11	Q12527	1178 aa		4.52	□□□□□ -1.69
CNN1	YFR046C	MAK31	P23059	88 aa		4.51	□□□□□ -1.69
CNN1	YFR046C	URA1	P28272	314 aa	Predicted RBP	4.51	□□□□□ -1.69
CNN1	YFR046C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
CNN1	YFR046C	CTF8	P38877	133 aa		4.51	□□□□□ -1.69
CNN1	YFR046C	TVP23	P38962	199 aa		4.51	□□□□□ -1.69
CNN1	YFR046C	ALD5	P40047	520 aa	Known RBP	4.51	□□□□□ -1.69
CNN1	YFR046C	ALR2	P43553	858 aa		4.51	□□□□□ -1.69
CNN1	YFR046C	DAS1	P47005	663 aa		4.51	□□□□□ -1.69
CNN1	YFR046C	SPN1	Q06505	410 aa	Predicted RBP	4.51	□□□□□ -1.69
CNN1	YFR046C	YPR071W	Q12346	211 aa		4.51	□□□□□ -1.69
CNN1	YFR046C	SWI6	P09959	803 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	KIN82	P25341	720 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	HBS1	P32769	611 aa	Known RBP	4.5	□□□□□ -1.69
CNN1	YFR046C	PRS1	P32895	427 aa	Known RBP	4.5	□□□□□ -1.69
CNN1	YFR046C	STE5	P32917	917 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	YBR284W	P38150	797 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	YHR078W	P38799	552 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	CRG1	P38892	291 aa	RIP-Chip data	4.5	□□□□□ -1.69	RIP-Chip
CNN1	YFR046C	ELO3	P40319	345 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	CSM2	P40465	213 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	SDS3	P40505	327 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
CNN1	YFR046C	MDM1	Q01846	1127 aa		4.5	□□□□□ -1.69
CNN1	YFR046C	EMI2	Q04409	500 aa	Known RBP	4.5	□□□□□ -1.69
CNN1	YFR046C	YLR422W	Q06409	1932 aa		4.49	□□□□□ -1.69
CNN1	YFR046C	YHL017W	P38745	532 aa		4.49	□□□□□ -1.69
CNN1	YFR046C	RPP1	P38786	293 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms