RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RRP6Q12149 733 aaKnown RBP3.99□□□□□ -1.77
SEC4YFL005W ZRT2Q12436 422 aa3.99□□□□□ -1.77
SEC4YFL005W YKL033W-AQ86ZR7 236 aa3.99□□□□□ -1.77
SEC4YFL005W YEF3P16521 1044 aaKnown RBP3.98□□□□□ -1.77
SEC4YFL005W FEN2P25621 512 aaKnown RBP3.98□□□□□ -1.77
SEC4YFL005W MTH1P35198 433 aa3.98□□□□□ -1.77
SEC4YFL005W COS111P38308 924 aa3.98□□□□□ -1.77
SEC4YFL005W SSP120P39931 234 aaKnown RBP3.98□□□□□ -1.77
SEC4YFL005W EAF5P39995 279 aa3.98□□□□□ -1.77
SEC4YFL005W YIL092WP40497 633 aa3.98□□□□□ -1.77
SEC4YFL005W YIL077CP40508 320 aa3.98□□□□□ -1.77
SEC4YFL005W PRM2P40534 656 aa3.98□□□□□ -1.77
SEC4YFL005W PAN2P53010 1115 aaPredicted RBP3.98□□□□□ -1.77
SEC4YFL005W YAP1802P53309 568 aa3.98□□□□□ -1.77
SEC4YFL005W YFT2Q06676 274 aa3.98□□□□□ -1.77
SEC4YFL005W VPS5Q92331 675 aa3.98□□□□□ -1.77
SEC4YFL005W MTC7P32633 139 aa3.97□□□□□ -1.77
SEC4YFL005W SDS22P36047 338 aa3.97□□□□□ -1.77
SEC4YFL005W CDS1P38221 457 aa3.97□□□□□ -1.77
SEC4YFL005W RIM4P38741 713 aa3.97□□□□□ -1.77
SEC4YFL005W SFB3P38810 929 aa3.97□□□□□ -1.77
SEC4YFL005W HRB1P38922 454 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SEC4YFL005W RRP8P38961 392 aaKnown RBP3.97□□□□□ -1.77
SEC4YFL005W PUS4P48567 403 aaKnown RBP3.97□□□□□ -1.77
SEC4YFL005W TAN1P53072 289 aaPredicted RBP3.97□□□□□ -1.77
SEC4YFL005W PEF1P53238 335 aa3.97□□□□□ -1.77
SEC4YFL005W RIA1P53893 1110 aa3.97□□□□□ -1.77
SEC4YFL005W HLR1Q04429 423 aa3.97□□□□□ -1.77
SEC4YFL005W CHS5Q12114 671 aaKnown RBP3.97□□□□□ -1.77
SEC4YFL005W PSF3Q12146 194 aa3.97□□□□□ -1.77
SEC4YFL005W TUF1P02992 437 aaKnown RBP3.96□□□□□ -1.78
SEC4YFL005W HMG2P12684 1045 aa3.96□□□□□ -1.78
SEC4YFL005W PHO3P24031 467 aa3.96□□□□□ -1.78
SEC4YFL005W CWH43P25618 953 aa3.96□□□□□ -1.78
SEC4YFL005W PHO11P35842 467 aa3.96□□□□□ -1.78
SEC4YFL005W PHO12P38693 467 aa3.96□□□□□ -1.78
SEC4YFL005W CRG1P38892 291 aaRIP-Chip data3.96□□□□□ -1.78not detected
SEC4YFL005W SAW1P39735 261 aa3.96□□□□□ -1.78
SEC4YFL005W FTR1P40088 404 aa3.96□□□□□ -1.78
SEC4YFL005W HIS6P40545 261 aa3.96□□□□□ -1.78
SEC4YFL005W ASK10P48361 1146 aa3.96□□□□□ -1.78
SEC4YFL005W RFX1P48743 811 aa3.96□□□□□ -1.78
SEC4YFL005W TEL2P53038 688 aa3.96□□□□□ -1.78
SEC4YFL005W FHN1P53279 174 aa3.96□□□□□ -1.78
SEC4YFL005W PAP2P53632 584 aaKnown RBP3.96□□□□□ -1.78
SEC4YFL005W SQS1P53866 767 aaKnown RBP3.96□□□□□ -1.78
SEC4YFL005W UBX4P54730 416 aa3.96□□□□□ -1.78
SEC4YFL005W FDC1Q03034 503 aa3.96□□□□□ -1.78
SEC4YFL005W AIM41Q12032 185 aa3.96□□□□□ -1.78
SEC4YFL005W NUR1Q12066 484 aa3.96□□□□□ -1.78
SEC4YFL005W PIF1P07271 859 aa3.95□□□□□ -1.78
SEC4YFL005W NTH1P32356 751 aa3.95□□□□□ -1.78
SEC4YFL005W TGL1P34163 548 aa3.95□□□□□ -1.78
SEC4YFL005W RMA1P36001 430 aaKnown RBP3.95□□□□□ -1.78
SEC4YFL005W TAF5P38129 798 aa3.95□□□□□ -1.78
SEC4YFL005W MAD2P40958 196 aa3.95□□□□□ -1.78
SEC4YFL005W MNT2P53059 558 aa3.95□□□□□ -1.78
SEC4YFL005W GND2P53319 492 aa3.95□□□□□ -1.78
SEC4YFL005W CEG1Q01159 459 aaPredicted RBP3.95□□□□□ -1.78
SEC4YFL005W YCG1Q06680 1035 aa3.95□□□□□ -1.78
SEC4YFL005W MLH3Q12083 715 aa3.95□□□□□ -1.78
SEC4YFL005W DIN7Q12086 430 aa3.95□□□□□ -1.78
SEC4YFL005W RTK1Q12100 620 aaPredicted RBP3.95□□□□□ -1.78
SEC4YFL005W PWP2P25635 923 aaKnown RBP3.94□□□□□ -1.78
SEC4YFL005W VPS24P36095 224 aaKnown RBP3.94□□□□□ -1.78
SEC4YFL005W YHL041WP38730 149 aa3.94□□□□□ -1.78
SEC4YFL005W SCS2P40075 244 aaKnown RBP3.94□□□□□ -1.78
SEC4YFL005W KHA1P40309 873 aa3.94□□□□□ -1.78
SEC4YFL005W QRI7P43122 407 aa3.94□□□□□ -1.78
SEC4YFL005W MPS3P47069 682 aa3.94□□□□□ -1.78
SEC4YFL005W TAH11P47112 604 aa3.94□□□□□ -1.78
SEC4YFL005W SSL2Q00578 843 aa3.94□□□□□ -1.78
SEC4YFL005W VMS1Q04311 632 aaKnown RBP3.94□□□□□ -1.78
SEC4YFL005W TRI1Q05024 226 aa3.94□□□□□ -1.78
SEC4YFL005W YOL114CQ12322 202 aa3.94□□□□□ -1.78
SEC4YFL005W ARP7Q12406 477 aa3.94□□□□□ -1.78
SEC4YFL005W VAS1P07806 1104 aaKnown RBP3.93□□□□□ -1.78
SEC4YFL005W MSS18P08593 268 aa3.93□□□□□ -1.78
SEC4YFL005W PGI1P12709 554 aaKnown RBP3.93□□□□□ -1.78
SEC4YFL005W ABF1P14164 731 aa3.93□□□□□ -1.78
SEC4YFL005W TUP1P16649 713 aa3.93□□□□□ -1.78
SEC4YFL005W THR1P17423 357 aaKnown RBP3.93□□□□□ -1.78
SEC4YFL005W PET309P32522 965 aaPredicted RBP3.93□□□□□ -1.78
SEC4YFL005W MSS1P32559 526 aaPredicted RBP3.93□□□□□ -1.78
SEC4YFL005W CTP1P38152 299 aa3.93□□□□□ -1.78
SEC4YFL005W YHL017WP38745 532 aa3.93□□□□□ -1.78
SEC4YFL005W TMN3P40071 706 aa3.93□□□□□ -1.78
SEC4YFL005W YDL183CP48569 320 aa3.93□□□□□ -1.78
SEC4YFL005W YNR071CP53757 342 aa3.93□□□□□ -1.78
SEC4YFL005W TEP1P53916 434 aa3.93□□□□□ -1.78
SEC4YFL005W HOS1Q12214 470 aa3.93□□□□□ -1.78
SEC4YFL005W CBP3P21560 335 aa3.92□□□□□ -1.78
SEC4YFL005W FUB1P25659 250 aa3.92□□□□□ -1.78
SEC4YFL005W PMC1P38929 1173 aaPredicted RBP3.92□□□□□ -1.78
SEC4YFL005W MDR1P53258 950 aa3.92□□□□□ -1.78
SEC4YFL005W ATG4P53867 494 aa3.92□□□□□ -1.78
SEC4YFL005W BRE1Q07457 700 aaKnown RBP3.92□□□□□ -1.78
SEC4YFL005W YDL086WQ07505 273 aa3.92□□□□□ -1.78
SEC4YFL005W IZH3Q07959 543 aa3.92□□□□□ -1.78
SEC4YFL005W DBP10Q12389 995 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms