RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B GFA1P14742 717 aaKnown RBP4.08□□□□□ -1.76
YFL002W-BYFL002W-B GMH1P36125 273 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B FLO10P36170 1169 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B YBR071WP38243 211 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B EAF5P39995 279 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B YGL081WP53156 320 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B FOL1P53848 824 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B COG6P53959 839 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B TRS23Q03784 219 aa4.08□□□□□ -1.76
YFL002W-BYFL002W-B CLF1Q12309 687 aaPredicted RBP4.08□□□□□ -1.76
YFL002W-BYFL002W-B PRP22P24384 1145 aaKnown RBP4.07□□□□□ -1.76
YFL002W-BYFL002W-B MF(ALPHA)2P32435 120 aa4.07□□□□□ -1.76
YFL002W-BYFL002W-B RMA1P36001 430 aaKnown RBP4.07□□□□□ -1.76
YFL002W-BYFL002W-B YDL183CP48569 320 aa4.07□□□□□ -1.76
YFL002W-BYFL002W-B RNR4P49723 345 aaKnown RBP4.07□□□□□ -1.76
YFL002W-BYFL002W-B SPO1P53541 631 aa4.07□□□□□ -1.76
YFL002W-BYFL002W-B SKY1Q03656 742 aa4.07□□□□□ -1.76
YFL002W-BYFL002W-B YSH1Q06224 779 aaPredicted RBP4.07□□□□□ -1.76
YFL002W-BYFL002W-B TRE2Q08693 809 aa4.07□□□□□ -1.76
YFL002W-BYFL002W-B PHO5P00635 467 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B COX11P19516 300 aaKnown RBP4.06□□□□□ -1.76
YFL002W-BYFL002W-B AEP2P22136 580 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B DMC1P25453 334 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B DGR2P32330 852 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B YMC2P38087 329 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B PPE1P38796 400 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B RIX1P38883 763 aaPredicted RBP4.06□□□□□ -1.76
YFL002W-BYFL002W-B PMT6P42934 759 aa4.06□□□□□ -1.76
YFL002W-BYFL002W-B DUG1P43616 481 aaKnown RBP4.06□□□□□ -1.76
YFL002W-BYFL002W-B LGE1Q02796 332 aaKnown RBP4.06□□□□□ -1.76
YFL002W-BYFL002W-B ABF1P14164 731 aa4.05□□□□□ -1.76
YFL002W-BYFL002W-B PLC1P32383 869 aa4.05□□□□□ -1.76
YFL002W-BYFL002W-B MRPL7P36519 292 aa4.05□□□□□ -1.76
YFL002W-BYFL002W-B SPC105P53148 917 aa4.05□□□□□ -1.76
YFL002W-BYFL002W-B YGR054WP53235 642 aaKnown RBP4.05□□□□□ -1.76
YFL002W-BYFL002W-B YCG1Q06680 1035 aa4.05□□□□□ -1.76
YFL002W-BYFL002W-B CWC2Q12046 339 aaPredicted RBP4.05□□□□□ -1.76
YFL002W-BYFL002W-B YEL076C-AP0CX16 216 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B YLR464WP0CX17 216 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B HMG2P12684 1045 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B STE4P18851 423 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B ADY2P25613 283 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B HEM12P32347 362 aaPredicted RBP4.04□□□□□ -1.76
YFL002W-BYFL002W-B NTH1P32356 751 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B APL3P38065 1025 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B YEL076CP39971 216 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B ASN1P49089 572 aaKnown RBP4.04□□□□□ -1.76
YFL002W-BYFL002W-B NSE5Q03718 556 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B PPN1Q04119 674 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B YOR378WQ08902 515 aa4.04□□□□□ -1.76
YFL002W-BYFL002W-B ACO1P19414 778 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
YFL002W-BYFL002W-B KCC4P25389 1037 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B MUP3P38734 546 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B PMC1P38929 1173 aaPredicted RBP4.03□□□□□ -1.76
YFL002W-BYFL002W-B YEL020CP39994 560 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B PEA2P40091 420 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B FDC1Q03034 503 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B YDR179W-AQ03983 463 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B UFO1Q04511 668 aa4.03□□□□□ -1.76
YFL002W-BYFL002W-B MDM20Q12387 796 aaKnown RBP4.03□□□□□ -1.76
YFL002W-BYFL002W-B SSB1P11484 613 aaKnown RBP4.02□□□□□ -1.77
YFL002W-BYFL002W-B SPO11P23179 398 aa4.02□□□□□ -1.77
YFL002W-BYFL002W-B SSB2P40150 613 aaKnown RBP4.02□□□□□ -1.77
YFL002W-BYFL002W-B YIL166CP40445 542 aa4.02□□□□□ -1.77
YFL002W-BYFL002W-B IRC5P43610 853 aa4.02□□□□□ -1.77
YFL002W-BYFL002W-B YIP4P53093 235 aa4.02□□□□□ -1.77
YFL002W-BYFL002W-B PEX14P53112 341 aa4.02□□□□□ -1.77
YFL002W-BYFL002W-B MFM1Q02783 413 aa4.02□□□□□ -1.77
YFL002W-BYFL002W-B EFR3Q03653 782 aaKnown RBP4.02□□□□□ -1.77
YFL002W-BYFL002W-B RTK1Q12100 620 aaPredicted RBP4.02□□□□□ -1.77
YFL002W-BYFL002W-B PCK1P10963 549 aa4.01□□□□□ -1.77
YFL002W-BYFL002W-B YMC1P32331 307 aa4.01□□□□□ -1.77
YFL002W-BYFL002W-B SQS1P53866 767 aaKnown RBP4.01□□□□□ -1.77
YFL002W-BYFL002W-B ARO10Q06408 635 aa4.01□□□□□ -1.77
YFL002W-BYFL002W-B BMS1Q08965 1183 aaKnown RBP4.01□□□□□ -1.77
YFL002W-BYFL002W-B ATF1P40353 525 aa4□□□□□ -1.77
YFL002W-BYFL002W-B MTD1Q02046 320 aaKnown RBP4□□□□□ -1.77
YFL002W-BYFL002W-B ARR3Q06598 404 aa4□□□□□ -1.77
YFL002W-BYFL002W-B AIM41Q12032 185 aa4□□□□□ -1.77
YFL002W-BYFL002W-B TUB1P09733 447 aaKnown RBP3.99□□□□□ -1.77
YFL002W-BYFL002W-B KAR1P11927 433 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B RPA135P22138 1203 aaKnown RBP3.99□□□□□ -1.77
YFL002W-BYFL002W-B ARG1P22768 420 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B YPT53P36019 220 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B LRO1P40345 661 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B YNL034WP53963 612 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B YNL018CP53976 612 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B APM1Q00776 475 aaPredicted RBP3.99□□□□□ -1.77
YFL002W-BYFL002W-B NGL2Q03264 515 aaKnown RBP3.99□□□□□ -1.77
YFL002W-BYFL002W-B PHM6Q05637 104 aa3.99□□□□□ -1.77
YFL002W-BYFL002W-B TPK2P06245 380 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B CUE2P36075 443 aaKnown RBP3.98□□□□□ -1.77
YFL002W-BYFL002W-B PAF1P38351 445 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B SRP68P38687 599 aaKnown RBP3.98□□□□□ -1.77
YFL002W-BYFL002W-B STB5P38699 743 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B YEL025CP39991 1188 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B MNT2P53059 558 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B SLD3P53135 668 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B PEF1P53238 335 aa3.98□□□□□ -1.77
YFL002W-BYFL002W-B HLR1Q04429 423 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms