RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	BUD8	P41698	603 aa		2.61	□□□□□ -1.99
DOT6	YER088C	RIA1	P53893	1110 aa		2.61	□□□□□ -1.99
DOT6	YER088C	VHS3	Q08438	674 aa		2.61	□□□□□ -1.99
DOT6	YER088C	STU1	P38198	1513 aa		2.61	□□□□□ -1.99
DOT6	YER088C	GDB1	Q06625	1536 aa		2.61	□□□□□ -1.99
DOT6	YER088C	PDR15	Q04182	1529 aa	Known RBP	2.6	□□□□□ -1.99
DOT6	YER088C	GLN4	P13188	809 aa	Known RBP	2.6	□□□□□ -1.99
DOT6	YER088C	THR1	P17423	357 aa	Known RBP	2.6	□□□□□ -1.99
DOT6	YER088C	MVD1	P32377	396 aa	Known RBP	2.6	□□□□□ -1.99
DOT6	YER088C	MF(ALPHA)2	P32435	120 aa		2.6	□□□□□ -1.99
DOT6	YER088C	HIS7	P33734	552 aa	Known RBP	2.6	□□□□□ -1.99
DOT6	YER088C	DUG1	P43616	481 aa	Known RBP	2.6	□□□□□ -1.99
DOT6	YER088C	YJR120W	P47157	116 aa		2.6	□□□□□ -1.99
DOT6	YER088C	SMX3	P54999	86 aa	Predicted RBP	2.6	□□□□□ -1.99
DOT6	YER088C	MCH5	Q08777	521 aa		2.6	□□□□□ -1.99
DOT6	YER088C	POM34	Q12445	299 aa		2.6	□□□□□ -1.99
DOT6	YER088C	IQG1	Q12280	1495 aa		2.6	□□□□□ -1.99
DOT6	YER088C	PDR10	P51533	1564 aa		2.59	□□□□□ -1.99
DOT6	YER088C	RPS17A	P02407	136 aa	Known RBP	2.59	□□□□□ -1.99
DOT6	YER088C	RPS17B	P14127	136 aa	Known RBP	2.59	□□□□□ -1.99
DOT6	YER088C	ATP12	P22135	325 aa		2.59	□□□□□ -1.99
DOT6	YER088C	YBR071W	P38243	211 aa		2.59	□□□□□ -1.99
DOT6	YER088C	REV7	P38927	245 aa		2.59	□□□□□ -1.99
DOT6	YER088C	DAS1	P47005	663 aa		2.59	□□□□□ -1.99
DOT6	YER088C	NIT2	P47016	307 aa		2.59	□□□□□ -1.99
DOT6	YER088C	YAP1802	P53309	568 aa		2.59	□□□□□ -1.99
DOT6	YER088C	COG6	P53959	839 aa		2.59	□□□□□ -1.99
DOT6	YER088C	YMR210W	Q03649	449 aa		2.59	□□□□□ -1.99
DOT6	YER088C	TMA17	Q12513	150 aa		2.59	□□□□□ -1.99
DOT6	YER088C	CHC1	P22137	1653 aa	Known RBP	2.59	□□□□□ -1.99
DOT6	YER088C	MLP2	P40457	1679 aa		2.59	□□□□□ -2
DOT6	YER088C	FEN2	P25621	512 aa	Known RBP	2.59	□□□□□ -2
DOT6	YER088C	PRE4	P30657	266 aa		2.59	□□□□□ -2
DOT6	YER088C	MTC7	P32633	139 aa		2.59	□□□□□ -2
DOT6	YER088C	MTH1	P35198	433 aa		2.59	□□□□□ -2
DOT6	YER088C	SET3	P36124	751 aa		2.59	□□□□□ -2
DOT6	YER088C	CDS1	P38221	457 aa		2.59	□□□□□ -2
DOT6	YER088C	PCL5	P38794	229 aa		2.59	□□□□□ -2
DOT6	YER088C	CCT7	P42943	550 aa	Known RBP	2.59	□□□□□ -2
DOT6	YER088C	RFX1	P48743	811 aa		2.59	□□□□□ -2
DOT6	YER088C	COX18	P53239	316 aa		2.59	□□□□□ -2
DOT6	YER088C	YHM2	Q04013	314 aa		2.59	□□□□□ -2
DOT6	YER088C	ZRT2	Q12436	422 aa		2.59	□□□□□ -2
DOT6	YER088C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
DOT6	YER088C	ARO1	P08566	1588 aa	Known RBP	2.58	□□□□□ -2
DOT6	YER088C	ERG20	P08524	352 aa	Known RBP	2.58	□□□□□ -2
DOT6	YER088C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
DOT6	YER088C	PRP28	P23394	588 aa		2.58	□□□□□ -2
DOT6	YER088C	YKR075C	P36155	307 aa		2.58	□□□□□ -2
DOT6	YER088C	VID28	P40547	921 aa		2.58	□□□□□ -2
DOT6	YER088C	YFT2	Q06676	274 aa		2.58	□□□□□ -2
DOT6	YER088C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
DOT6	YER088C	SUT2	Q12286	268 aa		2.58	□□□□□ -2
DOT6	YER088C	TAF3	Q12297	353 aa		2.58	□□□□□ -2
DOT6	YER088C	SSB1	P11484	613 aa	Known RBP	2.58	□□□□□ -2
DOT6	YER088C	SSB2	P40150	613 aa	Known RBP	2.58	□□□□□ -2
DOT6	YER088C	KHA1	P40309	873 aa		2.58	□□□□□ -2
DOT6	YER088C	QRI1	P43123	477 aa	Known RBP	2.58	□□□□□ -2
DOT6	YER088C	GND2	P53319	492 aa		2.58	□□□□□ -2
DOT6	YER088C	SSL2	Q00578	843 aa		2.58	□□□□□ -2
DOT6	YER088C	PTA1	Q01329	785 aa	Predicted RBP	2.58	□□□□□ -2
DOT6	YER088C	DIA2	Q08496	732 aa	Predicted RBP	2.58	□□□□□ -2
DOT6	YER088C	CHS5	Q12114	671 aa	Known RBP	2.58	□□□□□ -2
DOT6	YER088C	SEC7	P11075	2009 aa	Known RBP	2.57	□□□□□ -2
DOT6	YER088C	KIN82	P25341	720 aa		2.57	□□□□□ -2
DOT6	YER088C	STH1	P32597	1359 aa		2.57	□□□□□ -2
DOT6	YER088C	COS111	P38308	924 aa		2.57	□□□□□ -2
DOT6	YER088C	CRG1	P38892	291 aa	RIP-Chip data	2.57	□□□□□ -2	not detected
DOT6	YER088C	YIL077C	P40508	320 aa		2.57	□□□□□ -2
DOT6	YER088C	YDL183C	P48569	320 aa		2.57	□□□□□ -2
DOT6	YER088C	TAF4	P50105	388 aa		2.57	□□□□□ -2
DOT6	YER088C	SNF12	P53628	566 aa		2.57	□□□□□ -2
DOT6	YER088C	NSE5	Q03718	556 aa		2.57	□□□□□ -2
DOT6	YER088C	VBA4	Q04602	768 aa	Known RBP	2.57	□□□□□ -2
DOT6	YER088C	HBT1	Q07653	1046 aa	Known RBP	2.57	□□□□□ -2
DOT6	YER088C	MRH1	Q12117	320 aa	Predicted RBP	2.57	□□□□□ -2
DOT6	YER088C	USV1	Q12132	391 aa		2.57	□□□□□ -2
DOT6	YER088C	AEP2	P22136	580 aa		2.56	□□□□□ -2
DOT6	YER088C	HEM12	P32347	362 aa	Predicted RBP	2.56	□□□□□ -2
DOT6	YER088C	HXT4	P32467	576 aa		2.56	□□□□□ -2
DOT6	YER088C	NDC80	P40460	691 aa		2.56	□□□□□ -2
DOT6	YER088C	PXA1	P41909	870 aa		2.56	□□□□□ -2
DOT6	YER088C	IRC5	P43610	853 aa		2.56	□□□□□ -2
DOT6	YER088C	MPS3	P47069	682 aa		2.56	□□□□□ -2
DOT6	YER088C	FOL1	P53848	824 aa		2.56	□□□□□ -2
DOT6	YER088C	ATG4	P53867	494 aa		2.56	□□□□□ -2
DOT6	YER088C	TIM44	Q01852	431 aa		2.56	□□□□□ -2
DOT6	YER088C	SKY1	Q03656	742 aa		2.56	□□□□□ -2
DOT6	YER088C	IRC10	Q08118	586 aa		2.56	□□□□□ -2
DOT6	YER088C	RMP1	Q12530	201 aa		2.56	□□□□□ -2
DOT6	YER088C	MRC1	P25588	1096 aa		2.56	□□□□□ -2
DOT6	YER088C	PLC1	P32383	869 aa		2.56	□□□□□ -2
DOT6	YER088C	EMP70	P32802	667 aa		2.56	□□□□□ -2
DOT6	YER088C	CTP1	P38152	299 aa		2.56	□□□□□ -2
DOT6	YER088C	YHR097C	P38809	366 aa	Known RBP	2.56	□□□□□ -2
DOT6	YER088C	FTR1	P40088	404 aa		2.56	□□□□□ -2
DOT6	YER088C	PIG2	P40187	538 aa		2.56	□□□□□ -2
DOT6	YER088C	PRM2	P40534	656 aa		2.56	□□□□□ -2
DOT6	YER088C	BFA1	P47113	574 aa		2.56	□□□□□ -2
DOT6	YER088C	TGL2	P54857	326 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms