RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SPO14P36126 1683 aa4.46□□□□□ -1.7
PRE1YER012W DOP1Q03921 1698 aa4.46□□□□□ -1.7
PRE1YER012W ABF1P14164 731 aa4.46□□□□□ -1.7
PRE1YER012W PRP28P23394 588 aa4.46□□□□□ -1.7
PRE1YER012W YJR039WP47107 1121 aa4.46□□□□□ -1.7
PRE1YER012W ASN1P49089 572 aaKnown RBP4.46□□□□□ -1.7
PRE1YER012W MET13P53128 600 aa4.46□□□□□ -1.7
PRE1YER012W POM34Q12445 299 aa4.46□□□□□ -1.7
PRE1YER012W DNF2Q12675 1612 aa4.46□□□□□ -1.7
PRE1YER012W SNQ2P32568 1501 aaKnown RBP4.46□□□□□ -1.7
PRE1YER012W NUP1P20676 1076 aa4.45□□□□□ -1.7
PRE1YER012W IMG2P25642 146 aaPredicted RBP4.45□□□□□ -1.7
PRE1YER012W MSS1P32559 526 aaPredicted RBP4.45□□□□□ -1.7
PRE1YER012W CTP1P38152 299 aa4.45□□□□□ -1.7
PRE1YER012W COS111P38308 924 aa4.45□□□□□ -1.7
PRE1YER012W DIP5P53388 608 aa4.45□□□□□ -1.7
PRE1YER012W RCR2Q03446 210 aaKnown RBP4.45□□□□□ -1.7
PRE1YER012W VHS3Q08438 674 aa4.45□□□□□ -1.7
PRE1YER012W ICT1Q12385 394 aa4.45□□□□□ -1.7
PRE1YER012W ELF1P36053 145 aa4.44□□□□□ -1.7
PRE1YER012W PMT6P42934 759 aa4.44□□□□□ -1.7
PRE1YER012W MRK1P50873 501 aa4.44□□□□□ -1.7
PRE1YER012W GPD1Q00055 391 aaKnown RBP4.44□□□□□ -1.7
PRE1YER012W YFT2Q06676 274 aa4.44□□□□□ -1.7
PRE1YER012W RKI1Q12189 258 aa4.44□□□□□ -1.7
PRE1YER012W MDM20Q12387 796 aaKnown RBP4.44□□□□□ -1.7
PRE1YER012W RPS9BP05755 195 aaKnown RBP4.43□□□□□ -1.7
PRE1YER012W ERG20P08524 352 aaKnown RBP4.43□□□□□ -1.7
PRE1YER012W FRS1P15624 595 aaKnown RBP4.43□□□□□ -1.7
PRE1YER012W SAT4P25333 603 aaKnown RBP4.43□□□□□ -1.7
PRE1YER012W GLO1P50107 326 aa4.43□□□□□ -1.7
PRE1YER012W TFB2Q02939 513 aa4.43□□□□□ -1.7
PRE1YER012W YSH1Q06224 779 aaPredicted RBP4.43□□□□□ -1.7
PRE1YER012W YLR001CQ07895 862 aa4.43□□□□□ -1.7
PRE1YER012W ULS1Q08562 1619 aa4.43□□□□□ -1.7
PRE1YER012W SEC15P22224 910 aa4.42□□□□□ -1.7
PRE1YER012W TMT1P32643 299 aa4.42□□□□□ -1.7
PRE1YER012W APL3P38065 1025 aa4.42□□□□□ -1.7
PRE1YER012W TAX4P47030 604 aa4.42□□□□□ -1.7
PRE1YER012W BIT61P47041 543 aa4.42□□□□□ -1.7
PRE1YER012W SNT2P53127 1403 aa4.42□□□□□ -1.7
PRE1YER012W SLK19Q08581 821 aaKnown RBP4.42□□□□□ -1.7
PRE1YER012W ADE5,7P07244 802 aaKnown RBP4.41□□□□□ -1.7
PRE1YER012W SNF12P53628 566 aa4.41□□□□□ -1.7
PRE1YER012W GUD1Q07729 489 aa4.41□□□□□ -1.7
PRE1YER012W BMS1Q08965 1183 aaKnown RBP4.41□□□□□ -1.7
PRE1YER012W YKU70P32807 602 aa4.4□□□□□ -1.71
PRE1YER012W UGP1P32861 499 aaKnown RBP4.4□□□□□ -1.71
PRE1YER012W YPT7P32939 208 aa4.4□□□□□ -1.71
PRE1YER012W YEL1P34225 687 aa4.4□□□□□ -1.71
PRE1YER012W YKR075CP36155 307 aa4.4□□□□□ -1.71
PRE1YER012W BEM4P39011 633 aa4.4□□□□□ -1.71
PRE1YER012W XBP1P40489 647 aa4.4□□□□□ -1.71
PRE1YER012W TRS23Q03784 219 aa4.4□□□□□ -1.71
PRE1YER012W YDR179W-AQ03983 463 aa4.4□□□□□ -1.71
PRE1YER012W SEG1Q04279 960 aa4.4□□□□□ -1.71
PRE1YER012W HFD1Q04458 532 aa4.4□□□□□ -1.71
PRE1YER012W POB3Q04636 552 aaKnown RBP4.4□□□□□ -1.71
PRE1YER012W YLR407WQ06070 228 aa4.4□□□□□ -1.71
PRE1YER012W YPS7Q06325 596 aa4.4□□□□□ -1.71
PRE1YER012W ULA1Q12059 462 aa4.4□□□□□ -1.71
PRE1YER012W MYO4P32492 1471 aa4.4□□□□□ -1.71
PRE1YER012W DRS2P39524 1355 aa4.4□□□□□ -1.71
PRE1YER012W TPK2P06245 380 aa4.39□□□□□ -1.71
PRE1YER012W PET127P32606 800 aa4.39□□□□□ -1.71
PRE1YER012W UFO1Q04511 668 aa4.39□□□□□ -1.71
PRE1YER012W VBA4Q04602 768 aaKnown RBP4.39□□□□□ -1.71
PRE1YER012W COG8Q04632 607 aa4.39□□□□□ -1.71
PRE1YER012W NUP170P38181 1502 aa4.39□□□□□ -1.71
PRE1YER012W KIN82P25341 720 aa4.38□□□□□ -1.71
PRE1YER012W NTH1P32356 751 aa4.38□□□□□ -1.71
PRE1YER012W GAT1P43574 510 aa4.38□□□□□ -1.71
PRE1YER012W YNL193WP53870 558 aa4.38□□□□□ -1.71
PRE1YER012W YMR210WQ03649 449 aa4.38□□□□□ -1.71
PRE1YER012W IZH3Q07959 543 aa4.38□□□□□ -1.71
PRE1YER012W IME1P21190 360 aa4.37□□□□□ -1.71
PRE1YER012W TMN3P40071 706 aa4.37□□□□□ -1.71
PRE1YER012W GDB1Q06625 1536 aa4.36□□□□□ -1.71
PRE1YER012W MLP2P40457 1679 aa4.36□□□□□ -1.71
PRE1YER012W STE4P18851 423 aa4.36□□□□□ -1.71
PRE1YER012W PTP1P25044 335 aa4.36□□□□□ -1.71
PRE1YER012W MAL31P38156 614 aa4.36□□□□□ -1.71
PRE1YER012W BUD8P41698 603 aa4.36□□□□□ -1.71
PRE1YER012W BNA3P47039 444 aaKnown RBP4.36□□□□□ -1.71
PRE1YER012W SEC5P89102 971 aa4.36□□□□□ -1.71
PRE1YER012W TIM50Q02776 476 aa4.36□□□□□ -1.71
PRE1YER012W NGL2Q03264 515 aaKnown RBP4.36□□□□□ -1.71
PRE1YER012W PDR12Q02785 1511 aa4.36□□□□□ -1.71
PRE1YER012W PGK1P00560 416 aaKnown RBP4.35□□□□□ -1.71
PRE1YER012W APN1P22936 367 aa4.35□□□□□ -1.71
PRE1YER012W AAD3P25612 363 aa4.35□□□□□ -1.71
PRE1YER012W TDA3P38758 523 aa4.35□□□□□ -1.71
PRE1YER012W ARG7Q04728 441 aa4.35□□□□□ -1.71
PRE1YER012W ARO1P08566 1588 aaKnown RBP4.35□□□□□ -1.71
PRE1YER012W OSW7P43611 510 aa4.34□□□□□ -1.71
PRE1YER012W PIP2P52960 996 aa4.34□□□□□ -1.71
PRE1YER012W SDA1P53313 767 aaKnown RBP4.34□□□□□ -1.71
PRE1YER012W RPS21BQ3E754 87 aaKnown RBP4.34□□□□□ -1.71
PRE1YER012W AI5_ALPHAQ9ZZX1 630 aa4.34□□□□□ -1.71
PRE1YER012W PDR10P51533 1564 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms