RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YFT2Q06676 274 aa3.92□□□□□ -1.78
VAB2YEL005C USV1Q12132 391 aa3.92□□□□□ -1.78
VAB2YEL005C PSF3Q12146 194 aa3.92□□□□□ -1.78
VAB2YEL005C MPD2Q99316 277 aa3.92□□□□□ -1.78
VAB2YEL005C YEL076C-AP0CX16 216 aa3.91□□□□□ -1.78
VAB2YEL005C YLR464WP0CX17 216 aa3.91□□□□□ -1.78
VAB2YEL005C SEC12P11655 471 aa3.91□□□□□ -1.78
VAB2YEL005C ATP12P22135 325 aa3.91□□□□□ -1.78
VAB2YEL005C PRE4P30657 266 aa3.91□□□□□ -1.78
VAB2YEL005C MTH1P35198 433 aa3.91□□□□□ -1.78
VAB2YEL005C SDS22P36047 338 aa3.91□□□□□ -1.78
VAB2YEL005C YKL133CP36066 463 aa3.91□□□□□ -1.78
VAB2YEL005C TAF5P38129 798 aa3.91□□□□□ -1.78
VAB2YEL005C HRB1P38922 454 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
VAB2YEL005C YEL076CP39971 216 aa3.91□□□□□ -1.78
VAB2YEL005C RFX1P48743 811 aa3.91□□□□□ -1.78
VAB2YEL005C YNL034WP53963 612 aa3.91□□□□□ -1.78
VAB2YEL005C YNL018CP53976 612 aa3.91□□□□□ -1.78
VAB2YEL005C YSH1Q06224 779 aaPredicted RBP3.91□□□□□ -1.78
VAB2YEL005C VPS5Q92331 675 aa3.91□□□□□ -1.78
VAB2YEL005C TUF1P02992 437 aaKnown RBP3.9□□□□□ -1.79
VAB2YEL005C SIR3P06701 978 aa3.9□□□□□ -1.79
VAB2YEL005C PHO3P24031 467 aa3.9□□□□□ -1.79
VAB2YEL005C APL3P38065 1025 aa3.9□□□□□ -1.79
VAB2YEL005C RIM4P38741 713 aa3.9□□□□□ -1.79
VAB2YEL005C STL1P39932 569 aa3.9□□□□□ -1.79
VAB2YEL005C YEL025CP39991 1188 aa3.9□□□□□ -1.79
VAB2YEL005C PRM2P40534 656 aa3.9□□□□□ -1.79
VAB2YEL005C MPS3P47069 682 aa3.9□□□□□ -1.79
VAB2YEL005C CTR1P49573 406 aa3.9□□□□□ -1.79
VAB2YEL005C FHN1P53279 174 aa3.9□□□□□ -1.79
VAB2YEL005C RTS3P53289 263 aa3.9□□□□□ -1.79
VAB2YEL005C MTD1Q02046 320 aaKnown RBP3.9□□□□□ -1.79
VAB2YEL005C YCG1Q06680 1035 aa3.9□□□□□ -1.79
VAB2YEL005C YDL086WQ07505 273 aa3.9□□□□□ -1.79
VAB2YEL005C NUR1Q12066 484 aa3.9□□□□□ -1.79
VAB2YEL005C HOS1Q12214 470 aa3.9□□□□□ -1.79
VAB2YEL005C ICT1Q12385 394 aa3.9□□□□□ -1.79
VAB2YEL005C ATP4P05626 244 aa3.89□□□□□ -1.79
VAB2YEL005C SST2P11972 698 aaKnown RBP3.89□□□□□ -1.79
VAB2YEL005C HMG2P12684 1045 aa3.89□□□□□ -1.79
VAB2YEL005C THR1P17423 357 aaKnown RBP3.89□□□□□ -1.79
VAB2YEL005C FUB1P25659 250 aa3.89□□□□□ -1.79
VAB2YEL005C CTP1P38152 299 aa3.89□□□□□ -1.79
VAB2YEL005C EAF5P39995 279 aa3.89□□□□□ -1.79
VAB2YEL005C NDC80P40460 691 aa3.89□□□□□ -1.79
VAB2YEL005C IRC5P43610 853 aa3.89□□□□□ -1.79
VAB2YEL005C GND2P53319 492 aa3.89□□□□□ -1.79
VAB2YEL005C ATG4P53867 494 aa3.89□□□□□ -1.79
VAB2YEL005C SMX3P54999 86 aaPredicted RBP3.89□□□□□ -1.79
VAB2YEL005C MUK1Q02866 612 aa3.89□□□□□ -1.79
VAB2YEL005C FDC1Q03034 503 aa3.89□□□□□ -1.79
VAB2YEL005C HLR1Q04429 423 aa3.89□□□□□ -1.79
VAB2YEL005C KIN3P22209 435 aa3.88□□□□□ -1.79
VAB2YEL005C DMC1P25453 334 aa3.88□□□□□ -1.79
VAB2YEL005C YPT7P32939 208 aa3.88□□□□□ -1.79
VAB2YEL005C DHR2P36009 735 aaPredicted RBP3.88□□□□□ -1.79
VAB2YEL005C GLG1P36143 616 aa3.88□□□□□ -1.79
VAB2YEL005C PPE1P38796 400 aa3.88□□□□□ -1.79
VAB2YEL005C SSP120P39931 234 aaKnown RBP3.88□□□□□ -1.79
VAB2YEL005C TMN3P40071 706 aa3.88□□□□□ -1.79
VAB2YEL005C FTR1P40088 404 aa3.88□□□□□ -1.79
VAB2YEL005C KHA1P40309 873 aa3.88□□□□□ -1.79
VAB2YEL005C YIL092WP40497 633 aa3.88□□□□□ -1.79
VAB2YEL005C THI6P41835 540 aa3.88□□□□□ -1.79
VAB2YEL005C ASK10P48361 1146 aa3.88□□□□□ -1.79
VAB2YEL005C YGR151CP53287 111 aa3.88□□□□□ -1.79
VAB2YEL005C CNM67P53865 581 aaKnown RBP3.88□□□□□ -1.79
VAB2YEL005C CEF1Q03654 590 aaPredicted RBP3.88□□□□□ -1.79
VAB2YEL005C MLH3Q12083 715 aa3.88□□□□□ -1.79
VAB2YEL005C TUP1P16649 713 aa3.87□□□□□ -1.79
VAB2YEL005C KCC4P25389 1037 aa3.87□□□□□ -1.79
VAB2YEL005C CWH43P25618 953 aa3.87□□□□□ -1.79
VAB2YEL005C SEC6P32844 805 aa3.87□□□□□ -1.79
VAB2YEL005C ELF1P36053 145 aa3.87□□□□□ -1.79
VAB2YEL005C CRG1P38892 291 aaRIP-Chip data3.87□□□□□ -1.79not detected
VAB2YEL005C YJL206CP39529 758 aa3.87□□□□□ -1.79
VAB2YEL005C BDH2P39713 417 aa3.87□□□□□ -1.79
VAB2YEL005C PEF1P53238 335 aa3.87□□□□□ -1.79
VAB2YEL005C DIP5P53388 608 aa3.87□□□□□ -1.79
VAB2YEL005C SPC98P53540 846 aa3.87□□□□□ -1.79
VAB2YEL005C MET14Q02196 202 aa3.87□□□□□ -1.79
VAB2YEL005C TIM50Q02776 476 aa3.87□□□□□ -1.79
VAB2YEL005C RGC1Q06108 1083 aaKnown RBP3.87□□□□□ -1.79
VAB2YEL005C MLC2Q06580 163 aa3.87□□□□□ -1.79
VAB2YEL005C YOR378WQ08902 515 aa3.87□□□□□ -1.79
VAB2YEL005C PTP2P29461 750 aa3.86□□□□□ -1.79
VAB2YEL005C PET309P32522 965 aaPredicted RBP3.86□□□□□ -1.79
VAB2YEL005C GMH1P36125 273 aa3.86□□□□□ -1.79
VAB2YEL005C KSP1P38691 1029 aaKnown RBP3.86□□□□□ -1.79
VAB2YEL005C TPM2P40414 161 aa3.86□□□□□ -1.79
VAB2YEL005C SDS3P40505 327 aa3.86□□□□□ -1.79
VAB2YEL005C TAH11P47112 604 aa3.86□□□□□ -1.79
VAB2YEL005C DAK1P54838 584 aaKnown RBP3.86□□□□□ -1.79
VAB2YEL005C TGL2P54857 326 aa3.86□□□□□ -1.79
VAB2YEL005C UFO1Q04511 668 aa3.86□□□□□ -1.79
VAB2YEL005C YPL216WQ08964 1102 aa3.86□□□□□ -1.79
VAB2YEL005C PCK1P10963 549 aa3.85□□□□□ -1.79
VAB2YEL005C CBP3P21560 335 aa3.85□□□□□ -1.79
VAB2YEL005C TGL1P34163 548 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms