RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W MSH5Q12175 901 aa10.45□□□□□ -0.74
SNF1YDR477W DIP2Q12220 943 aaPredicted RBP10.45□□□□□ -0.74
SNF1YDR477W PDC5P16467 563 aaKnown RBP10.44□□□□□ -0.74
SNF1YDR477W ADP1P25371 1049 aa10.44□□□□□ -0.74
SNF1YDR477W TMT1P32643 299 aa10.44□□□□□ -0.74
SNF1YDR477W YKR015CP36111 568 aa10.44□□□□□ -0.74
SNF1YDR477W STB1P42845 420 aa10.44□□□□□ -0.74
SNF1YDR477W SET2P46995 733 aaKnown RBP10.44□□□□□ -0.74
SNF1YDR477W MAD3P47074 515 aa10.44□□□□□ -0.74
SNF1YDR477W GRX3Q03835 250 aa10.44□□□□□ -0.74
SNF1YDR477W ASA1Q06822 443 aa10.44□□□□□ -0.74
SNF1YDR477W YOR059CQ08448 450 aaKnown RBP10.44□□□□□ -0.74
SNF1YDR477W DBP10Q12389 995 aaKnown RBP10.44□□□□□ -0.74
SNF1YDR477W BCK2P33306 851 aa10.43□□□□□ -0.74
SNF1YDR477W GGA2P38817 585 aaKnown RBP10.43□□□□□ -0.74
SNF1YDR477W FRT2P39734 528 aa10.43□□□□□ -0.74
SNF1YDR477W YJL171CP46992 396 aa10.43□□□□□ -0.74
SNF1YDR477W HSH155P49955 971 aaKnown RBP10.43□□□□□ -0.74
SNF1YDR477W RPA14P50106 137 aa10.43□□□□□ -0.74
SNF1YDR477W NMA2P53204 395 aa10.43□□□□□ -0.74
SNF1YDR477W YKR005CQ02203 525 aa10.43□□□□□ -0.74
SNF1YDR477W ULP1Q02724 621 aa10.43□□□□□ -0.74
SNF1YDR477W SEM1O94742 89 aa10.43□□□□□ -0.74
SNF1YDR477W TUB2P02557 457 aaKnown RBP10.43□□□□□ -0.74
SNF1YDR477W TIF1P10081 395 aaKnown RBP10.43□□□□□ -0.74
SNF1YDR477W SEC63P14906 663 aa10.43□□□□□ -0.74
SNF1YDR477W SAN1P22470 610 aa10.43□□□□□ -0.74
SNF1YDR477W VPS34P22543 875 aa10.43□□□□□ -0.74
SNF1YDR477W KHA1P40309 873 aa10.43□□□□□ -0.74
SNF1YDR477W AVT1P47082 602 aa10.43□□□□□ -0.74
SNF1YDR477W PUS2P53167 370 aa10.43□□□□□ -0.74
SNF1YDR477W ASI2P53895 289 aa10.43□□□□□ -0.74
SNF1YDR477W MSH6Q03834 1242 aa10.43□□□□□ -0.74
SNF1YDR477W YET2Q04210 160 aa10.43□□□□□ -0.74
SNF1YDR477W PHM6Q05637 104 aa10.43□□□□□ -0.74
SNF1YDR477W YLR326WQ06170 240 aaKnown RBP10.43□□□□□ -0.74
SNF1YDR477W AI5_BETAQ9ZZX0 354 aa10.43□□□□□ -0.74
SNF1YDR477W EST1P17214 699 aaPredicted RBP10.42□□□□□ -0.74
SNF1YDR477W SSD1P24276 1250 aaKnown RBP RIP-Chip data10.42□□□□□ -0.74not detected
SNF1YDR477W MRP8P35719 219 aa10.42□□□□□ -0.74
SNF1YDR477W CBR1P38626 284 aaKnown RBP10.42□□□□□ -0.74
SNF1YDR477W SAW1P39735 261 aa10.42□□□□□ -0.74
SNF1YDR477W ARG2P40360 574 aa10.42□□□□□ -0.74
SNF1YDR477W FAR3P46671 204 aa10.42□□□□□ -0.74
SNF1YDR477W MUB1Q03162 620 aa10.42□□□□□ -0.74
SNF1YDR477W IWR1Q07532 353 aaPredicted RBP10.42□□□□□ -0.74
SNF1YDR477W VIK1Q12045 647 aa10.42□□□□□ -0.74
SNF1YDR477W NPT1P39683 429 aaKnown RBP10.41□□□□□ -0.74
SNF1YDR477W TMA108P40462 946 aa10.41□□□□□ -0.74
SNF1YDR477W CAB2P40506 365 aa10.41□□□□□ -0.74
SNF1YDR477W SBE2P42223 864 aaKnown RBP10.41□□□□□ -0.74
SNF1YDR477W SAD1P43589 448 aa10.41□□□□□ -0.74
SNF1YDR477W IES3Q12345 250 aa10.41□□□□□ -0.74
SNF1YDR477W ATP2P00830 511 aaKnown RBP10.41□□□□□ -0.74
SNF1YDR477W ATR1P13090 542 aa10.41□□□□□ -0.74
SNF1YDR477W RGR1P19263 1082 aa10.41□□□□□ -0.74
SNF1YDR477W BCS1P32839 456 aa10.41□□□□□ -0.74
SNF1YDR477W SSP120P39931 234 aaKnown RBP10.41□□□□□ -0.74
SNF1YDR477W BNA3P47039 444 aaKnown RBP10.41□□□□□ -0.74
SNF1YDR477W NOP9P47077 666 aaKnown RBP10.41□□□□□ -0.74
SNF1YDR477W HLJ1P48353 224 aa10.41□□□□□ -0.74
SNF1YDR477W YTP1P53584 459 aa10.41□□□□□ -0.74
SNF1YDR477W CRD1Q07560 283 aa10.41□□□□□ -0.74
SNF1YDR477W VMA1P17255 1071 aaKnown RBP10.4□□□□□ -0.74
SNF1YDR477W PRP6P19735 899 aaPredicted RBP10.4□□□□□ -0.74
SNF1YDR477W TRX1P22217 103 aaKnown RBP10.4□□□□□ -0.74
SNF1YDR477W FLC2P39719 783 aa10.4□□□□□ -0.74
SNF1YDR477W DSE1P40077 573 aa10.4□□□□□ -0.74
SNF1YDR477W PEP8P40335 379 aa10.4□□□□□ -0.74
SNF1YDR477W RLP7P40693 322 aaKnown RBP10.4□□□□□ -0.74
SNF1YDR477W VMA10P48836 114 aaKnown RBP10.4□□□□□ -0.74
SNF1YDR477W NUP84P52891 726 aa10.4□□□□□ -0.74
SNF1YDR477W LIF1P53150 421 aa10.4□□□□□ -0.74
SNF1YDR477W COG2P53271 262 aa10.4□□□□□ -0.74
SNF1YDR477W TMA20P89886 181 aaPredicted RBP10.4□□□□□ -0.74
SNF1YDR477W KAP95Q06142 861 aaKnown RBP10.4□□□□□ -0.74
SNF1YDR477W RRG1Q12167 365 aaPredicted RBP10.4□□□□□ -0.74
SNF1YDR477W ECM3Q99252 613 aa10.4□□□□□ -0.74
SNF1YDR477W STE6P12866 1290 aa10.39□□□□□ -0.75
SNF1YDR477W CNA1P23287 553 aa10.39□□□□□ -0.75
SNF1YDR477W PHO88P38264 188 aaPredicted RBP10.39□□□□□ -0.75
SNF1YDR477W YJL206CP39529 758 aa10.39□□□□□ -0.75
SNF1YDR477W YRB1P41920 201 aaKnown RBP10.39□□□□□ -0.75
SNF1YDR477W FMP32P43557 207 aa10.39□□□□□ -0.75
SNF1YDR477W YGL108CP53139 140 aa10.39□□□□□ -0.75
SNF1YDR477W SLT2Q00772 484 aa10.39□□□□□ -0.75
SNF1YDR477W RSM24Q03976 319 aa10.39□□□□□ -0.75
SNF1YDR477W THI7Q05998 598 aa10.39□□□□□ -0.75
SNF1YDR477W YSH1Q06224 779 aaPredicted RBP10.39□□□□□ -0.75
SNF1YDR477W SLY1P22213 666 aa10.39□□□□□ -0.75
SNF1YDR477W URE2P23202 354 aaKnown RBP10.39□□□□□ -0.75
SNF1YDR477W CDC3P32457 520 aaKnown RBP10.39□□□□□ -0.75
SNF1YDR477W SPR1P32603 445 aa10.39□□□□□ -0.75
SNF1YDR477W TIF3P34167 436 aaKnown RBP10.39□□□□□ -0.75
SNF1YDR477W RIM2P38127 377 aa10.39□□□□□ -0.75
SNF1YDR477W CTP1P38152 299 aa10.39□□□□□ -0.75
SNF1YDR477W TGL3P40308 642 aa10.39□□□□□ -0.75
SNF1YDR477W LAM5P43560 674 aa10.39□□□□□ -0.75
SNF1YDR477W TAH11P47112 604 aa10.39□□□□□ -0.75
SNF1YDR477W SQS1P53866 767 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms